Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29]
15,315 sequences; 1,213,420,527 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq668 118 9e-22
seq2 96.9 3e-15
>seq668
Length=9239207
Score = 118 bits (130), Expect = 9e-22
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || |||||||||||||| ||||| |||||||| | ||||| || ||||| |||
Sbjct 6239289 GTGGTGGAGGAGCTCTTCCGAGACGGGGTTAACTGGGGCAGAATTGTGGCCTTCTTCGAG 6239230
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
||||| ||||| ||||||||||| |||||||| | | || | |||| || |||| |
Sbjct 6239229 TTTGGCGGTGTGATGTGTGTGGAGAGCGTCAACCGGGAGATGTCTCCCCTTGTAGACAGC 6239170
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| || || |||||||| ||
Sbjct 6239169 ATCGCTGCCTGGATGACTGA 6239150
>seq2
Length=61069995
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|||||||| | || |||||||||||||| | || ||||||||| | ||| |||||
Sbjct 50380740 AGCCCTGTAACATGGGCAATCATGTATGTGAGCAGTGAGTAGCTGGCAATATTGAAAGGC 50380681
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| || || ||||| ||| | || ||||| || | ||||||||| | ||||| ||| |
Sbjct 50380680 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCCCCATTTAGA 50380621
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||| || || | | || |||||||||| | ||||
Sbjct 50380620 ACATAGAATTGGCAAAGAGCATGGCATGGAGGCAAAGCCAT 50380580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414399437257660
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |