Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq23847 196 1e-45 >seq23847 Length=8263 Score = 196 bits (216), Expect = 1e-45 Identities = 340/483 (70%), Gaps = 16/483 (3%) Strand=Plus/Minus Query 23570 CGTCAATTTGTTTGGCGTGTTCAGTAAGATGATTAGACGCTAAGTGTGCATATCGCCTTA 23629 ||||||||| | | || ||||| || ||||| | | | || ||| ||||| ||| | Sbjct 7368 CGTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAA 7309 Query 23630 CCATTTCGACTGAT-TCCCATCCACCCATTTCTTGTAAAACAGAAAGTGGAACGCCAGAC 23688 ||||||| | || | |||||||| ||||||||||| | | |||||||| ||||| | | Sbjct 7308 CCATTTCTA-TGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCC 7250 Query 23689 TGAATTAACCAGCTAGCCCAAGTATGTCTCAGATCATGAAAGCGAAAATTTTCTATTCCG 23748 |||| ||||| || ||||| ||||| | |||||| |||||||| |||| |||||| Sbjct 7249 TGAACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCC 7190 Query 23749 GC--TCGTTTTAATGCCGCCCTCCATGCCGTATTAGAATCGACCCGCATTTTTCTAATCG 23806 || || ||| | | |||| || | ||| ||| ||||||||||| |||| | Sbjct 7189 GCCCTCCGTTTCCCGGTGT--TCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAACTG 7132 Query 23807 AATTTGTTTGTGAACCATCAGATCGCTT---TGCTGACATTGTATGTACGAATACCCATT 23863 || | || ||| ||| || ||||| | ||||| || || || | Sbjct 7131 CCGCGGTCACTCCGCCGCCAGGTCGTTTCCGTGCTGTC---GTATGCACAAAGACGTACC 7075 Query 23864 TTTGATGATTACCCAAT-TG-TCGCGTCAGAATACAGCAAGCCGTATCGTTTAGAGCTAC 23921 | || || |||||| || || || || | | ||| || |||||||| ||||| || Sbjct 7074 GTGAGTGCTT-CCCAATCTGATCACG-CAATGTTCGGCACGCGGTATCGTTCAGAGCAAC 7017 Query 23922 ACCTATAGCTTTTCCCGATTTGCTGTTTTCTGGCTCTATCCAGGCAACTTTTCTTTGCAT 23981 || ||||| || |||| |||| ||| ||||| | ||||| || || ||||||||||| Sbjct 7016 GCCAATAGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTTTGCAT 6957 Query 23982 ATCAATTTGTGACCACGCTAAATTAATGATATTTGAACGACGTAACCCGGTTGCCAGCGC 24041 |||| || |||||| | | || |||||||||||||| |||| || |||||||| || Sbjct 6956 GTCAACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAGGGC 6897 Query 24042 AAA 24044 ||| Sbjct 6896 AAA 6894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116434529362152