Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq9582 113 3e-20 seq2976 91.5 1e-13 >seq9582 Length=68461266 Score = 113 bits (124), Expect = 3e-20 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| || ||| ||||||| || | |||||||||| |||| | ||| || ||||||||||| Sbjct 57331468 CTTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTCAGAGGACGATTCTTCTCAGG 57331409 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 ||| |||||||| || ||||||||||| |||| | |||||||||| ||| Sbjct 57331408 AATGGAGAACCATGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCTG 57331359 >seq2976 Length=93210757 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 ||||| || ||||||||| | || | || |||||||| ||||| || || ||||||||| Sbjct 47119765 GTGACGTGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGCACTCCT 47119824 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | |||||||| | || || ||||||||||| || || || | |||| ||||| Sbjct 47119825 AGTCCCATATCTCCAGACCTCTGATACAGTTGGCAAGACAGTTCACCATTTAGAACATAG 47119884 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCT 101920 || || | | |||| ||||| ||||| |||| || ||| ||| Sbjct 47119885 AACTGGCAAAGAGCATGGCAAGGTGGCAAAGCCATCAGAGAAATATCT 47119932 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| |||||||||||||| |||||||| || || ||||| || ||||| | || || | Sbjct 47123966 CTTTGTATTCTGCTCCGAAGTGCCTCCATTGGAAACCATAAACTGGTCCCAAGTCCCCCT 47124025 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | ||||| |||| || | ||||| | || | |||||||| |||||||||| Sbjct 47124026 CTTCTCTAGAGCAAAACCCCTGCTTATCCAGGAACTCACGTGATCCATTGGCATCCCAAA 47124085 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180 | | || || ||| || |||||||| Sbjct 47124086 TCTTTACACCCTTTGCAGAGAGCTCTTT 47124113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360232905794786