Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq142870 154 1e-32 >seq142870 Length=314 Score = 154 bits (170), Expect = 1e-32 Identities = 216/303 (71%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 106194 CGCCATCAACTGTCCAAAATTGCCTTTATACGGCTCGTTCCAAGCGGACACACCTTTTTG 106253 |||||||| ||| || || ||||| || || || || | ||| |||| ||| || || || Sbjct 6 CGCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTG 65 Query 106254 GGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGCAACTTTGAAATCTTCGCGTCCCTT 106313 | |||||| | ||||| |||||||||| || | |||||||| || ||||| |||| Sbjct 66 CGCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTG 125 Query 106314 GCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTATCGTTTTGAGGGCGTCGTTTATTCC 106373 || || | ||||| | | || || || ||| ||| ||| |||||| || || Sbjct 126 ACAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCC 185 Query 106374 ATCGCCGCCGCAGATGGGTATGAAACCATACAACAAGTGTGATAAATTTGGCAAGGGAAC 106433 || |||||||||||| || || || || |||| || ||| | | ||| || || | Sbjct 186 ATTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGAT 245 Query 106434 TTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCACTCAACAAAGTACGCAGCGACAAT 106493 ||||| |||| || ||||||||||| || |||||||| || || || | | |||| | Sbjct 246 CTTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACGAC 305 Query 106494 TTT 106496 ||| Sbjct 306 TTT 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427128607286330