Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq142870 168 5e-37 >seq142870 Length=314 Score = 168 bits (186), Expect = 5e-37 Identities = 219/303 (72%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 97961 CGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCAAGCGGACACGCCCTTTTG 98020 |||||||| || || || ||||| ||||| || || | ||| |||| ||||||||| || Sbjct 6 CGCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTG 65 Query 98021 GGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTTGAAATCTTCGCGTCCCCT 98080 | |||||| | ||||| ||||||||||||| | |||||||| || ||||| ||| Sbjct 66 CGCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTG 125 Query 98081 GCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTTGAGGGCGTCGTTTATTCC 98140 || || || |||| || | ||||| || || ||| ||| |||||| || || Sbjct 126 ACAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCC 185 Query 98141 ATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTGCGATAAATTTGGCAAGGGAAC 98200 || ||| |||||||| || || || ||||||| || ||| | | ||| || || | Sbjct 186 ATTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGAT 245 Query 98201 TTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGACAAAGTACGCAGCGACAAT 98260 ||||| |||| || |||||||||| || ||||||||||| || || | | |||| | Sbjct 246 CTTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACGAC 305 Query 98261 TTT 98263 ||| Sbjct 306 TTT 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409638846750404