Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2976 102 6e-17 >seq2976 Length=93210757 Score = 102 bits (112), Expect = 6e-17 Identities = 111/147 (76%), Gaps = 8/147 (5%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||||||||| || |||||||||||||| |||||||| ||||| | ||| || |||||| Sbjct 47123971 TATTCTGCTCCGAAGTGCCTCCATTGGAAACCATAAACTGGTCCCAAGTCCCCCTCTTCT 47124030 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 ||| || || || ||||||| |||| || |||||||| ||||||||||| Sbjct 47124031 CTAGAGCAAAACCCCTGCTTATC----CAGGAACTCACGTGATCCATTGGCATCCCAAAT 47124086 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTT 97544 | ||||| ||| | |||||||| Sbjct 47124087 CTTTACACCCTTTGCAGAGAGCTCTTT 47124113 Score = 91.5 bits (100), Expect = 1e-13 Identities = 129/180 (72%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||| ||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 47119765 GTGACGTGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGCACTCCT 47119824 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || || | |||| ||||| Sbjct 47119825 AGTCCCATATCTCCAGACCTCTGATACAGTTGGCAAGACAGTTCACCATTTAGAACATAG 47119884 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| | | |||| || || ||||| ||||| | || |||||||| ||| ||| Sbjct 47119885 AACTGGCAAAGAGCATGGCAAGGTGGCAAAGCCATCAGAGAAATATCTAAGA-ATTACAA 47119943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345806485911020