Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq7314 109 6e-19 seq142870 107 2e-18 seq1 102 9e-17 seq7705 100 3e-16 seq26691 98.7 1e-15 >seq7314 Length=17450715 Score = 109 bits (120), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 |||||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 3976010 TTTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 3975951 Query 60122 ACTATACTACCGAGGATTGA 60141 ||||||||| |||||| ||| Sbjct 3975950 ACTATACTAACGAGGAGTGA 3975931 >seq142870 Length=314 Score = 107 bits (118), Expect = 2e-18 Identities = 197/289 (68%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 96467 CTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGACAAGGTGCCCATTC 96526 ||||||| || || |||||||| |||| || || || ||| |||||| | || | Sbjct 295 CTTATTTCGTCGAGTGGGGCGTTTACGGGCGCAATTTCACCGTCGACAAGATCCCGGCGC 236 Query 96527 CCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAGGCGACGGTATCAACG 96586 || ||||| || || ||||||| ||||| || || ||||| ||| | || ||||||| Sbjct 235 AAAACCTGACCCACCTGCTGTACGGCTTTATCCCGATCTGCGGCGGCAATGGCATCAACG 176 Query 96587 ACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCGGCAGAG 96646 |||| || ||| || | ||| ||| |||| || || || ||| ||| | | Sbjct 175 ACAGCCTGAAAGAGATCGAAGGCAGTTTCCAGGCCTTGCAGCGCTCCTGTCAGGGCCGCG 116 Query 96647 ACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAAAAGGTG 96706 | || ||||| || |||||||| | || || || |||||| |||| || || | Sbjct 115 AGGACTTCAAAGTCTCGATCCACGATCCGTTCGCCGCGCTGCAAAAAGCGCAGAAGGGCG 56 Query 96707 TTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGC 96755 | ||| | |||| || ||| ||||| || |||||||| ||||| Sbjct 55 TGACCGCCTGGGATGACCCCTACAAGGGCAACTTCGGCCAGCTGATGGC 7 >seq1 Length=190651702 Score = 102 bits (112), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 || ||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 82180128 TTCTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 82180069 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 82180068 ACTATACTAACGAGGA 82180053 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 44950234 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 44950175 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 44950174 ATACTAACGAGGA 44950162 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 44950411 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 44950470 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 44950471 ATACTAACGAGGA 44950483 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 82178065 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 82178124 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 82178125 ATACTAACGAGGA 82178137 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 82179486 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 82179427 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 82179426 TACTAACGAGGA 82179415 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 44074627 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 44074568 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 44074567 TACTAACGAGGA 44074556 >seq7705 Length=13065498 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 4575704 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 4575645 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 4575644 ATACTAACGAGGA 4575632 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 4575108 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4575049 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 4575048 TACTAACGAGGA 4575037 >seq26691 Length=439 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 345 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 404 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 405 TACTAACGAGGA 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570164432432080