Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2002 114 1e-20 seq2976 111 2e-19 >seq2002 Length=109662234 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||||||||| || || ||||| ||||| || | ||| ||||| || |||| ||| | Sbjct 93266413 CCTCATCTCTACTGATGAGCTCGTTAGAAAAAGTGAGTCCAGGCATTAAGCCTCTTTTCT 93266354 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | |||||| |||| || || || || |||||||| ||||| || ||||| ||||| | Sbjct 93266353 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAATG 93266294 Query 14346 CTATTAATCGTTCTCC 14361 ||| || |||||||| Sbjct 93266293 CTACTACACGTTCTCC 93266278 >seq2976 Length=93210757 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| || |||||||| || || || || ||||| ||||||| || | || | Sbjct 73918721 CCTCATCTCTGCTGATAAGTTCATTGGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCT 73918780 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||||||||| ||||| ||||| || |||||||| || || |||||||||||||| | Sbjct 73918781 TCAGCCAAAATATAGCAGCAAATGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 73918840 Query 14346 C 14346 | Sbjct 73918841 C 73918841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480951102694480