Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq142870 143 2e-29 seq8367 98.7 8e-16 seq7705 98.7 8e-16 >seq142870 Length=314 Score = 143 bits (158), Expect = 2e-29 Identities = 204/287 (71%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 91657 GCCATTATCTGACCAAAGTTGCCCTTGTAAGGCTCGTTCCAAGCGGATACACCTTTTTGT 91716 ||||| | ||| || |||||||||||||| || || | ||| |||| || || || || Sbjct 7 GCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTGC 66 Query 91717 GGTTTTTGTATGGCTGCCCACGGATCGTGTATGGAAACTTTAAAATCATCGCGTCCTTTG 91776 | |||||| | || || |||||||||| || || ||||| || || ||||| || | Sbjct 67 GCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTGA 126 Query 91777 CACGATCGTTGCAAATTTTCAAAACTACCAGGTATTGTTTTGAGGGCATCGTTTAATCCA 91836 || || || ||||| | ||||| || || ||| ||| ||||| | ||| Sbjct 127 CAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCCA 186 Query 91837 TCGCCTCCGCAAATGGGTATAAAACCGTACAACAGATGGGACAAATTTGGCAGCGGCACC 91896 | ||| ||||| || || ||||| ||||||| ||| |||| || ||| || ||| | | Sbjct 187 TTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGATC 246 Query 91897 TTGTCGATTGGAAAGTTGCGTCCGTACACGCCCCATTCAACAAAGTA 91943 ||||||| | || ||||| ||||| |||||||| || || || || Sbjct 247 TTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATA 293 >seq8367 Length=9740059 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || |||| ||| || || || || || || ||||||||||| | | Sbjct 8892988 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 8892929 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| || ||||| || |||| || || || ||||| || Sbjct 8892928 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGGA 8892869 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||| || |||| ||| || | | ||| ||||||| |||||| Sbjct 8892868 ATGCCTTCCTTGTCTTGGATTTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACC 8892809 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTA 18330 || | ||||||| | ||||| |||| || || ||||| || ||||| |||| Sbjct 8892808 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTTA 8892757 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || || || || ||||||||||| | || || | ||| Sbjct 8893201 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 8893142 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || ||||| || | ||||||||| || Sbjct 8893141 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCT 8893082 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | | ||| ||||||| |||||| || | ||||||| | Sbjct 8893081 TGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTC 8893022 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 8893021 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 8892990 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | | |||| ||| || || || ||||| || ||||||||||| | | Sbjct 8893444 CCTCCCCTCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 8893385 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||||||| || ||||| ||| |||| || || || ||||| || Sbjct 8893384 AGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 8893325 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||| || || | ||| || | | ||| |||||||| ||| || Sbjct 8893324 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCACTGGGTTCAACC 8893265 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| | ||||| || | || || ||||| || ||||| Sbjct 8893264 TCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 8893218 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || |||||||| || ||||||||||| | || || | ||| Sbjct 8893657 AGCACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 8893598 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || ||||| || | |||||| || || Sbjct 8893597 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCT 8893538 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | ||| ||||||| |||||| |||| |||||| | Sbjct 8893537 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTC 8893478 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| || | ||||| ||||| || ||||| Sbjct 8893477 TTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 8893446 >seq7705 Length=13065498 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || |||| ||| || || || || || || ||||||||||| | | Sbjct 4578646 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578587 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| || ||||| ||| |||| || ||||| ||||| ||| Sbjct 4578586 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGGGGA 4578527 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || ||| | |||||| | ||| ||||||| |||||| Sbjct 4578526 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTCTCAATGGTGTCACTAGGCTCGACC 4578467 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| | || || ||||| || || ||||| || ||||| Sbjct 4578466 TCCAGAGTGATGGTCTTACCCGTCAAGGTCTTCACAAAGATCTGCAT 4578420 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || |||| ||| || || || || || || ||||||||||| | | Sbjct 4578418 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578359 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| || ||||| ||| |||| || || || ||||| ||| Sbjct 4578358 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 4578299 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || || | |||||| | | | || |||| ||| || Sbjct 4578298 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTATCACTGGGTTCCACC 4578239 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | ||||||| | ||||| ||||| || || || || || ||||| || Sbjct 4578238 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATGTT 4578189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378274705844070