Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq33712 214 6e-51 seq194231 154 5e-33 seq200661 149 2e-31 seq63993 141 3e-29 seq55791 132 2e-26 seq188449 127 7e-25 seq149116 120 1e-22 seq40770 113 2e-20 seq201839 109 2e-19 seq145634 98.7 3e-16 >seq33712 Length=1189 Score = 214 bits (236), Expect = 6e-51 Identities = 251/339 (74%), Gaps = 3/339 (1%) Strand=Plus/Minus Query 22911 TTTCACAATGGCAAATCCCATTATTCCCTGGATCGGCGGCAAGCGTCGACTCGCTGACCA 22970 || || ||||||| |||||| ||||||||| | |||||||||||||| | ||||| | Sbjct 410 TTACAAAATGGCATCTCCCATCATTCCCTGGCTGGGCGGCAAGCGTCGCTTGGCTGATCG 351 Query 22971 CATCATCCCGCGCTTTCCGAAGCACGACTGTTACGTCGAGGTGTTCGCGGGCGGGGCGGC 23030 | | | ||| ||||||| ||| | || |||||||| |||||| ||||| || || Sbjct 350 CCTTCTGCCGTACTTTCCGCCTCACCAGTGCTACGTCGAACCGTTCGCAGGCGGCGCAGC 291 Query 23031 GCTGTACTTCATGCGACC---GCCAGCCAGGGTCGAGGTGATCAACGATATCAACGGCGA 23087 ||| ||| |||| || ||| ||| |||||||| ||||||| ||||||| || Sbjct 290 CATGTTCTTTCTGCGGCCTATGCCGGCCGACGTCGAGGTTCTCAACGACGTCAACGGAGA 231 Query 23088 GCTGGTGAACCTGTATCGCGTCGTTCAGCACCATCTCGAAGAGTTCGTGCGTCAGTTCAA 23147 ||| | ||||| ||||| || || |||| || || || || ||||| || |||||||| Sbjct 230 ACTGATCAACCTCTATCGGGTGGTGAAGCATCACCTGGAGGAATTCGTACGCCAGTTCAA 171 Query 23148 ATGGGCGCTGACGAGCCGGCAGGTGTTCGAGTGGCTGAAGCATACGGTCCCGGAAACCCT 23207 |||||||||| ||||||| ||||||||| | ||||| || || ||| ||||| Sbjct 170 ATGGGCGCTGTCGAGCCGACAGGTGTTCAAATGGCTCCAGATCACACCTGAGGAGACCCT 111 Query 23208 CACCGACATCCAGCGTGCGGCACGCTTCTACTACCTGCA 23246 |||||||||||||| || || | |||| ||| || || Sbjct 110 GACCGACATCCAGCGGGCCGCCAGGTTCTTCTATCTACA 72 >seq194231 Length=202 Score = 154 bits (170), Expect = 5e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23122 CTCGAAGAGTTCGTGCGTCAGTTCAAATGGGCGCTGACGAGCCGGCAGGTGTTCGAGTGG 23181 || || || ||||| || |||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 3 CTGGAGGAATTCGTCCGCCAGTTCAAGTGGGCGCTGACCAGCCGGCAGATGTTCAAGTGG 62 Query 23182 CTGAAGCATACGGTCCCGGAAACCCTCACCGACATCCAGCGTGCGGCACGCTTCTACTAC 23241 | ||| | ||| || || || || || || || ||||| ||||| |||||||||||| Sbjct 63 CAGAAAGAAACGCGGCCCGAGACGCTGACTGATATTCAGCGGGCGGCCCGCTTCTACTAC 122 Query 23242 CTGCAAAAAAGTTGCTTTGGCGGGAAGCTTGAAGGGCAGACGTTCGGAACGGCGACGACT 23301 ||| | | ||||| |||| ||||| || || ||||||||||| || || ||||| Sbjct 123 CTGATGCAGAACTGCTTCAGCGGCAAGCTGGAGGGTCAGACGTTCGGCACCGCAACGACG 182 Query 23302 ACGGTGCCGGGCCTGAACCT 23321 || |||||| |||||||| Sbjct 183 GCGCCGCCGGGGCTGAACCT 202 >seq200661 Length=255 Score = 149 bits (164), Expect = 2e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 22913 TCACAA-TGGCAAATCCCATTATTCCCTGGATCGGCGGCAAGCGTCGACTCGCTGACCAC 22971 |||||| ||||||| || || ||||||||| | || |||||||| || || || ||| | Sbjct 24 TCACAAGTGGCAAAACCGATCATTCCCTGGCTGGGTGGCAAGCGCCGCCTGGCCGACAAG 83 Query 22972 ATCATCCCGCGCTTTCCGAAGCACGACTGTTACGTCGAGGTGTTCGCGGGCGGGGCGGC- 23030 || | || | ||||| ||||| ||| ||||||||| ||||||||||||||||| Sbjct 84 ATTCTTCCCCTTTTTCCCAAGCATTCCTGCTACGTCGAGCCATTCGCGGGCGGGGCGGCA 143 Query 23031 --GCTGTACTTCATGCGACCGCCAGCCAGGGTCGAGGTGATCAACGATATCAACGGCGAG 23088 ||| | | || | ||| |||| ||| |||||| | ||||| ||||||||||| Sbjct 144 TTGCTTTTCGCCAGGTCGGAGCCGGCCAAGGTGGAGGTGCTGAACGACATCAACGGCGAC 203 Query 23089 CTGGTGAACCTGTATCGCGTCGTTCAGCACCATCTCGAAGAGTTCGTGCG 23138 ||||| |||||||| || || || || ||||| || || || ||||| || Sbjct 204 CTGGTCAACCTGTACCGGGTAGTGCAACACCACCTGGAGGAATTCGTCCG 253 >seq63993 Length=1130 Score = 141 bits (156), Expect = 3e-29 Identities = 233/333 (70%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 23374 TACATCGAGCGGCTCGATTGGGCGACCTGCATCGATCGTTACGATCGGCCGCACACGCTG 23433 ||| |||||| ||||||||||||| | ||||| || || ||||| ||||||||||| || Sbjct 12 TACGTCGAGCAGCTCGATTGGGCGGCGTGCATTGACCGCTACGACCGGCCGCACACACTC 71 Query 23434 TTCTACCTTGATCCGCCGTACTTCGAGACTGAAGGGTACGGCGTCGCATTCCCTTTCACG 23493 |||||| ||||||||| |||| |||||||| ||||||||||| | || |||| Sbjct 72 TTCTACGCTGATCCGCCCTACTGGGAGACTGAGGGGTACGGCGTGCCGTTTCCTTGGGAA 131 Query 23494 GAGTACGAGAAGATGGCCGAGCGGCTGCGGTCGATCAAGGGGCGCGCGATCGTCAGCCTC 23553 |||||||| |||||| | ||| |||||||||| || | |||||| || Sbjct 132 CAGTACGAGCTGATGGCGGCCAAGCTCAAAACGATCAAGGGCAAAGCAGTGGTCAGCATC 191 Query 23554 AACGACCATCCGGAGATCCGGCGCGTG-TTCGCCGGTTTCCATATCGAGAGCGTGCCGAT 23612 || || || || | ||||| | | ||| ||| | ||| | || ||| | | | Sbjct 192 AATGATCACCCTGCGATCC-GAGAGTGCTTCAGGGACTTCGACATGGAGGCTCTCAAGCT 250 Query 23613 TCAGTACAC---GATAGGCGGCGGGAAGGGCGTCGAGCGCCGCGAGCTGATCATTTTCAG 23669 | ||||| | || |||| || | ||||||||| |||||||| |||| | ||| Sbjct 251 GGACTACACCGTGGGTGGGGGCGCCAATCGTGTCGAGCGCGGCGAGCTGGTCATCTACAG 310 Query 23670 TTGGGACGATGCGGCGCAGCCAGTCGGGCTGTT 23702 |||| || | ||| |||||| || ||||| Sbjct 311 TTGGAACAGGGAGGCAGAGCCAGCAGGCCTGTT 343 >seq55791 Length=415 Score = 132 bits (146), Expect = 2e-26 Identities = 268/394 (68%), Gaps = 4/394 (1%) Strand=Plus/Minus Query 23286 CGGAACGGCGACGACTACGGTGCCGGGCCTGAACCTGCTGCGCATCGAAGAAGAGCTATC 23345 ||| || || ||||| || |||||| ||||||||||| || | |||||| | | || Sbjct 415 CGGCACCGCAACGACGGCGCCGCCGGGGCTGAACCTGCTCCGGCTGGAAGAAACGTTGTC 356 Query 23346 GGCGGCGCACATTCGTCTCGCGAATGCGTACATCGAGCGGCTCGATTGGGCGACCTGCAT 23405 || || ||| |||| || ||| | ||| | |||| || ||| | ||| | Sbjct 355 CGCAGCCCACCTTCGCCTGGCGCGTATCTACGTGGAGCATCTGCCCTGGCTGGATTGCGT 296 Query 23406 CGATCGTTACGATCGGCCGCACACGCTGTTCTACCTTGATCCGCCGTACTTCGAGACTGA 23465 | || ||||| ||||||||||||| |||||| | || ||||| |||| || || | Sbjct 295 GAAGCGCTACGACAGGCCGCACACGCTCTTCTACATGGACCCGCCCTACTGGGACACGGC 236 Query 23466 AGGGTACGGCGTCGCATTCCCTTTCACGGAGTACGAGAAGATGGCCGAGCGGCTGCGGTC 23525 || ||||| || | |||| || | |||||| | |||||| || ||||||| Sbjct 235 CGGCTACGGAGTGGAATTCGGCATCGAGCAGTACGCGGCGATGGCTGATTCCATGCGGTC 176 Query 23526 GATCAAGGGGCGCGCGATCGTCAGCCTCAACGACCATCCGGAGATCCGGCGCGTGTTCGC 23585 ||| || || |||||| | |||||| |||| ||||||||| |||| || | ||||| Sbjct 175 GATGAAAGGTCGCGCGCTGGTCAGCGTCAATGACCATCCGAAGATGCGCGAAGCCTTCGC 116 Query 23586 CGG--TTTCCATATCGAGAGCGTGCCGATTCAGTACACGATAGGCGGCGGGAAGGGCGTC 23643 ||| ||||||| | | || || || | ||||| | ||||| || |||||| Sbjct 115 CGGCTTTTCCAT-GCAGGTGC-TGGACATCCGCTACACCGTCGGCGGGGGCGGGGGCGTG 58 Query 23644 GAGCGCCGCGAGCTGATCATTTTCAGTTGGGACG 23677 |||| ||||||| | ||| || |||| || Sbjct 57 CCGCGCGCCGAGCTGCTGATTCAGAGCTGGGCCG 24 >seq188449 Length=255 Score = 127 bits (140), Expect = 7e-25 Identities = 194/278 (70%), Gaps = 24/278 (9%) Strand=Plus/Minus Query 31566 TCAACCGGCCCGAGCAAAGGCTCCATCGACAGGAAGCGCACGCGAGCGGGCACTGCGAGC 31625 || || || || |||| |||||||| || |||||||||||||| || |||| || ||| Sbjct 254 TCCACAGGACCCAGCAGGGGCTCCATGGAGAGGAAGCGCACGCGCGCAGGCAAGGCCAGC 195 Query 31626 AGCTTCGGAATGTCGCGGTCGGCCTCGGCCTGATTCACGATCGTCGCGCCGAGCCAGACA 31685 |||||||| |||||||||||||||||| ||| || ||||||||| || ||||| || Sbjct 194 AGCTTCGGGATGTCGCGGTCGGCCTCGCTCTGGTTGGTGATCGTCGCACCCAGCCAAAC- 136 Query 31686 TGCGGCCACGGCCACTCACGCTCATCGCGCATGATGCTGCCGAGGACGCTGGAAATCATA 31745 | | || ||| | ||| ||| ||| | ||| | ||| Sbjct 135 -GTTGTCA-GGCAGC-------CAT--------------CCGGGGATGATGGCCACCATC 99 Query 31746 TCCCGCGCGTTTCCGATTCGCTTCGTCAGTAGCAGCCAGTCGAGATTTGGCGTGTTGCTG 31805 | || |||| ||||| ||||| ||||| |||| ||| || ||||| || |||| || | Sbjct 98 GCGGGCACGTTGCCGATGCGCTTGGTCAGCAGCAACCAATCCAGATTGGGTGTGTCGCGG 39 Query 31806 ATCAAATCGAAGAGATCGACTCGCCACATCGGATAGAC 31843 || | ||||||| ||| | |||||| ||||| ||| Sbjct 38 ATGAGGGCGAAGAGGTCGGCGCGCCACTGCGGATCGAC 1 >seq149116 Length=413 Score = 120 bits (132), Expect = 1e-22 Identities = 282/421 (67%), Gaps = 16/421 (4%) Strand=Plus/Plus Query 18082 AAGTGGGCGCTGTACGCAATCGCGCGTCACTGTGACGAGCTGGTATCGGACGGGAAGGGC 18141 ||||||| |||||| |||| || | || |||||| |||| ||||| ||| Sbjct 1 AAGTGGGGCCTGTACCAGATCGGCCGCTATTGCGACGAGATGGTCGATGACGGCTTCGGC 60 Query 18142 GGCAAGGAGCCGCGCTTTACGTGCAAC---TGCGTGATTCAGACAAAGGCGGATGCGTTC 18198 || ||||| |||||||| || |||||| | | || ||| | ||| || || | | Sbjct 61 GGAAAGGAACCGCGCTTCACCTGCAACGTCTACCTGCAACAGGC---GGCCGACGCCTAC 117 Query 18199 AAGGTCGTGCAGGATATCGCAAGTGTCTTTCGCGGGATTTCGTATTGGGGGGCCGGCTCC 18258 ||| |||||||| |||| | || ||||| || | ||||||| || | || Sbjct 118 CGGGTGGTGCAGGACTTCGCCTCCATTTTCCGCGGCATGGCTTATTGGGCCAACGCCGCC 177 Query 18259 GTCGTCGCGTCGGCCGATATGCCGTCCGATCCGGTCTACCTGTACACGGCCGCGAACGTC 18318 || |||| |||||||| |||||| ||||||||||||| || | || | || ||||| Sbjct 178 GTGTTCGCCTCGGCCGACATGCCGGGCGATCCGGTCTACACGTTCTCGTCGGCCAACGTG 237 Query 18319 GTCGGCGGTTCATTCAAGTACGTCGGCAGCGAGCGCAAGACGCGCTACACGGTCGCGCTC 18378 |||| || ||||| ||||||||| | || | ||||||||||| || ||||| Sbjct 238 GTCGATGGCCGCTTCAACTACGTCGGCTCGGCGCTGACCACGCGCTACACCGTGGCGCTG 297 Query 18379 GTCAGCTACAACGA----TCCGACGAACCAGT-ACAAGCAGGCTGTCGAAGCCGTGCAGG 18433 || || ||||| ||||| || || | || || ||||| ||| || Sbjct 298 GTGTCCTGGAACGACATGTCCGA--AATGGGTCGCCAGAAG---GTCGAGTACGTCGAGA 352 Query 18434 ACGACGACGGGATCGCGCGATACGGCGTCATCAAGACGGAGGTCACGGCGTTCGGCTGCA 18493 || ||| || |||||||| || || || || ||| || || | ||||||||||| Sbjct 353 ACCGCGAAGGCATCGCGCGCTATGGAATCCAGCAGGTGGAAGTGACCGGGTTCGGCTGCA 412 Query 18494 C 18494 | Sbjct 413 C 413 >seq40770 Length=2654 Score = 113 bits (124), Expect = 2e-20 Identities = 143/189 (76%), Gaps = 7/189 (4%) Strand=Plus/Minus Query 34451 TGCGGCGTGC-AGCCGA-TCATCGGCGCAATC-GATTCGACGGCCGCCCACATCGACGGG 34507 ||| ||| || | |||| || | ||||||||| || || | ||| ||||||| ||| ||| Sbjct 1862 TGCCGCGCGCCACCCGAATCTTGGGCGCAATCCGACTCAATGGCTGCCCACAGCGAGGGG 1803 Query 34508 TGCTCGCTACGCTGCTCGCGTACCAGGCGCACTGCGCGCTCTCGGACTTCCGGGGAAAAC 34567 ||| || ||||| | ||| |||||| |||||||| ||||||||| |||| || Sbjct 1802 GAGTCGGCTCGATGCTCCTGCACCGTGCGCACGGCGCGCTCGCGGACTTCCAGGGAGGAC 1743 Query 34568 TGCT-TGGCTTCTGTTCATGGCTCCATTCTCTCA-GAGTTGGAGCCTCCACAAACTCGGG 34625 | | || ||| |||||||||||||| ||||| ||||||||||| || |||| ||| Sbjct 1742 TTCGGTGACTT--GTTCATGGCTCCATCTTCTCAAGAGTTGGAGCCCCCTCAAATCCGGA 1685 Query 34626 GCGGTTCAG 34634 |||||||| Sbjct 1684 ACGGTTCAG 1676 >seq201839 Length=207 Score = 109 bits (120), Expect = 2e-19 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 22904 AAACGGCTTT-CACAATGGCAAATCCCATTATTCCCTGGATCGGCGGCAAGCGTCGACTC 22962 ||||| ||| || ||||||| |||||| ||||| ||| ||||||||||||| || || Sbjct 3 AAACGAATTTACAAAATGGCATCTCCCATCATTCCGTGGCTCGGCGGCAAGCGCCGCCTG 62 Query 22963 GCTGACCACATCATCCCGCGCTTTCCGAAGCACGACTGTTACGTCGAGGTGTTCGCGGGC 23022 || |||| | | ||| || || ||| | || || |||||| |||||| ||| Sbjct 63 GCCGACCGTCTGCTTCCGTATTTCCCACCCCACCAGTGCTATGTCGAGCCGTTCGCCGGC 122 Query 23023 GGGGCGGCGCTGTACTTCATGCGACC---GCCAGCCAGGGTCGAGGTGATCAACGATATC 23079 |||||||| ||| |||| |||| || | | ||| || || || ||||||| || Sbjct 123 GGGGCGGCCATGTTCTTCCTGCGGCCCATGGCGGCCGACGTTGAAGTACTCAACGACGTC 182 Query 23080 AACGGCGAGCTGGTGAACCTGTA 23102 || ||||||||| | |||||||| Sbjct 183 AATGGCGAGCTGATAAACCTGTA 205 >seq145634 Length=321 Score = 98.7 bits (108), Expect = 3e-16 Identities = 124/165 (75%), Gaps = 8/165 (5%) Strand=Plus/Plus Query 16944 CGATGGCATTGGGCGGCATCGTGCAGATGCTCAGTCC---GCAACAGGCCGGGCTCG-CG 16999 ||||| | |||||||| | |||||| |||||| || ||||| |||| | || | Sbjct 124 CGATGACGCTGGGCGGCGTGGTGCAGTTGCTCACGCCACAGCAACGGGCCCTGAGCGTCA 183 Query 17000 GGGACGG--CCAACAACGGCACGTCGTACTACTTCAACGGACCCGTGAACAGTGCGGCGC 17057 |||||| || |||||||| |||||||| |||||||||| || || |||| |||||| Sbjct 184 AGGACGGGCCCGACAACGGCGCGTCGTACAACTTCAACGGCCCGGTCAACACCACGGCGC 243 Query 17058 AGGGCGAACCGGTGCCGCT-CGTTATCGGCGAAATGATCGTCGGC 17101 ||||| | || |||||| | | ||| ||||| ||| |||| ||| Sbjct 244 AGGGCAACCCCGTGCCGGTGCTGTAT-GGCGAGATGTTCGTGGGC 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170203245725220