Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq33737 95.1 9e-15 seq145555 87.8 1e-12 >seq33737 Length=870 Score = 95.1 bits (104), Expect = 9e-15 Identities = 116/156 (74%), Gaps = 7/156 (4%) Strand=Plus/Plus Query 99762 AGGGGTCGCCCG-GTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGCCCG 99820 ||| |||| || ||| |||||||| | | ||| | |||||| | |||||||||| Sbjct 403 AGGCGTCGGCCTTGTACAGCAGCGACAGGATCATGGCGTTGATCCCGACCGACTTGCCCG 462 Query 99821 ATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTAGCCAGGTTCAGGGAGATGTCC- 99879 ||||||| | ||| ||||||||||| ||||||||||| ||||||| || | || Sbjct 463 ATCCGGTGGTGCCCGCCACCAGCAGGTGCGGCATCTTGGCCAGGT---CGGCCACCACCG 519 Query 99880 --TTGCCCTCGACGTCCTTGCCCACTGCCACGGTCA 99913 ||||| ||| ||||||||||| |||| ||||| Sbjct 520 GGTTGCCGGCGATGTCCTTGCCCAGCGCCATGGTCA 555 >seq145555 Length=361 Score = 87.8 bits (96), Expect = 1e-12 Identities = 130/184 (71%), Gaps = 3/184 (2%) Strand=Plus/Plus Query 99376 CGCGAGGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTC 99435 |||| ||| | |||| |||||| ||||| || | ||| |||||| ||| ||||| || Sbjct 29 CGCGTGGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACGCTGGGGCGCTGGGTG 88 Query 99436 GCCAGGACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCC 99495 ||||||| || || ||||||||||| || |||||||| || | ||| | || || Sbjct 89 GCCAGGATCAGGTGGATGCCGGCCGCGCGGGCCTTCTGGGCCAGGCGCGCGATCAGCTCC 148 Query 99496 TCAACCTCTTTCTTGTAGCCACCCATCATGAGATCAGCGAGTTCATCCACCACTACCACG 99555 || | | |||||| | | ||||||| || || || || || || | || | ||| Sbjct 149 TCGATC---TTCTTGCCGACCACCATCATCAGGTCGGCCAGCTCGTCGATGACGATGACG 205 Query 99556 ATGT 99559 |||| Sbjct 206 ATGT 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353643532412796