Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24]
231,286 sequences; 1,128,339,136 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq8367 93.3 3e-14
>seq8367
Length=9740059
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
|||||||||||| | | || | || |||||||| || || || |||||||| ||
Sbjct 8893218 TGCCACCTCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 8893159
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
|| | | | ||||||| | || |||||||| | |||| | || || ||| |
Sbjct 8893158 ACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAG 8893099
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|||| ||||| ||||| |||||| ||| || |||| ||||| || || || |
Sbjct 8893098 GAATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAA 8893039
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || | ||| ||||| || || ||||| || || ||||| || |||||
Sbjct 8893038 CCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 8892990
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| |||||||| ||||| || |||||||| || || | | | ||||||| | ||
Sbjct 8893648 TGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTGC 8893589
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|||||||| | |||| | || || ||| ||||| ||||||||||| || |||
Sbjct 8893588 TTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGGATCTTG 8893529
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || ||||| || || || || || | || ||||| || || ||
Sbjct 8893528 GCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCAGTA 8893469
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
|| ||||| ||||| || |||||
Sbjct 8893468 AGGGTTTTCACAAAGATCTGCAT 8893446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361158289950126
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |