Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq142870 199 3e-46 >seq142870 Length=314 Score = 199 bits (220), Expect = 3e-46 Identities = 223/298 (75%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 100993 CGCCATTAGCTGACCGAAATTGCCCTTGTACGGCTCGTTCCATGCGGACACGCCCTTTTG 101052 |||||| ||||| ||||| ||||||||||| || || | ||| |||| ||||||||| || Sbjct 6 CGCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTG 65 Query 101053 CGGTTTTTGTATTGCGGCCCAGGGATCGTGAATGGCGACTTTGAAATCTGAACGACCCTT 101112 || |||||| | ||||| | |||||||| || | ||||||||| || || |||| Sbjct 66 CGCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTG 125 Query 101113 GCAGGAGCGCTGCAGCGCTTCAAAACTGCCGGGAATGGTTTTGAGGGCGTCGTTGAGGCC 101172 ||||||||||||| || | |||||||| || ||| ||| |||||||| ||| Sbjct 126 ACAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCC 185 Query 101173 GTCGCCGCCGCAAATGGGTATGAACCCGTACAACAGATGCGAGAGATTGGGCAGCGGCAC 101232 | ||||||||| || || || || ||||||| ||| || | || || || ||| | Sbjct 186 ATTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGAT 245 Query 101233 TTTGTCTACCGGAAAATTGCGGCCGTACACGCCCCACTCTACAAAATACGCAGCGACG 101290 ||||| || | |||||||| ||||| ||||||||||| || ||||| | | ||||| Sbjct 246 CTTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACG 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413404202968684