Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq20500 197 4e-46 >seq20500 Length=13099 Score = 197 bits (218), Expect = 4e-46 Identities = 352/514 (68%), Gaps = 0/514 (0%) Strand=Plus/Plus Query 42974 AAATTGAGCGCGGCAATTCTGGCGCTGATCGCTACTGGAGCTTCTGCACCAGTAATGATG 43033 ||| | ||||| | ||| ||||| || ||||| | || || || || || || |||||| Sbjct 3177 AAACTCAGCGCCGTAATGCTGGCCCTAATCGCCGCCGGCGCATCGGCTCCTGTGATGATG 3236 Query 43034 TCTCAATTTCAGAAAGAAAAAGAAGGCACAAGCCTGATTGCTTATCCTGACAACGGCGGT 43093 || || |||||| |||| ||||||||| | |||||| || || | ||| | || Sbjct 3237 TCGCAGTTTCAGGAAGAGAAAGAAGGCCAACGCCTGAACGCCTACCAGGACGGAGTAGGC 3296 Query 43094 GTCTGGACTATTTGCGGTGGTGTTACGCGCGTGGACGGAAAACCAGTCGTTAAGGGCATG 43153 ||||||| |||||||| || || || || |||| || || || |||||| | Sbjct 3297 ATCTGGACAATTTGCGGCGGCGTGACAATGGTCAACGGCAAGAAGGTTGTGAAGGGCCAG 3356 Query 43154 AAGCTCACTCAAACACAATGCAACTCCATCGACAAGGCAGAGCAAGCCAAAGCGCTGTTA 43213 || || || ||||| || |||| |||||||| || ||||| Sbjct 3357 CGCCTGACCGCTGAGCAGTGCAAGGAGATTGACACAGCAGAGCAGAAAAAGGCGCTCGAT 3416 Query 43214 TGGGTGCAGAAGAATGTCTACGTTCCTCTGACAGAGCCGCAAAAGGTCGGGATCGCTTCA 43273 ||||| | || ||| | || | ||||| || |||||||| ||||| ||||| || Sbjct 3417 TGGGTAGACCGCAACGTCAAGGTAACGCTGACTGAACCGCAAAAAGTCGGCATCGCGTCC 3476 Query 43274 TTCTGCCCTTGGAACATTGGCCCGAGTAAATGTTTCACTTCTACGTTCTATCGAAAATTA 43333 ||||||||||||||||| ||||| | || || ||||| || || || || || | Sbjct 3477 TTCTGCCCTTGGAACATCGGCCCCGGAAAGTGCTTCACCTCAACCTTTTACAAGAAGCTG 3536 Query 43334 AATTTAGGCGACCGCTTAGGCGCGTGCGCTGAAATTAAACGCTGGATACATGACGGCGGG 43393 || ||||||||| | || || ||| ||||| ||||||||| | |||| || Sbjct 3537 AACGCCGGCGACCGCATTGGTGCCTGCCGCGAAATCCGCCGCTGGATATACGACGCTGGC 3596 Query 43394 AAAGATTGCCGTATTCGCTCCAATAACTGTTACGGGCAGATAGAGCGCCGTGAACAAGAA 43453 ||||||||| || ||||| |||| ||||||||||||||| ||| || || ||||| Sbjct 3597 CGAGATTGCCGCATCCGCTCGAATAGCTGTTACGGGCAGATCTTGCGGCGCGACCAAGAG 3656 Query 43454 AGCGAATTAACGTGTTGGGGGCTGGATGAATAAA 43487 ||| | | || ||||||||||| ||| || Sbjct 3657 GCCGAGCTGGCTTGCTGGGGGCTGGACAAATGAA 3690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147756266622732