Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq33712 214 6e-51 seq188449 197 5e-46 seq194231 154 5e-33 seq200661 149 2e-31 seq63993 141 3e-29 seq149116 138 4e-28 seq55791 132 2e-26 seq201839 109 2e-19 seq145634 102 3e-17 >seq33712 Length=1189 Score = 214 bits (236), Expect = 6e-51 Identities = 251/339 (74%), Gaps = 3/339 (1%) Strand=Plus/Minus Query 22172 TTTCACAATGGCAAATCCCATTATTCCCTGGATCGGCGGCAAGCGTCGACTCGCTGACCA 22231 || || ||||||| |||||| ||||||||| | |||||||||||||| | ||||| | Sbjct 410 TTACAAAATGGCATCTCCCATCATTCCCTGGCTGGGCGGCAAGCGTCGCTTGGCTGATCG 351 Query 22232 CATCATCCCGCGCTTTCCGAAGCACGACTGTTACGTCGAGGTGTTCGCGGGCGGGGCGGC 22291 | | | ||| ||||||| ||| | || |||||||| |||||| ||||| || || Sbjct 350 CCTTCTGCCGTACTTTCCGCCTCACCAGTGCTACGTCGAACCGTTCGCAGGCGGCGCAGC 291 Query 22292 GCTGTACTTCATGCGACC---GCCAGCCAGGGTCGAGGTGATCAACGATATCAACGGCGA 22348 ||| ||| |||| || ||| ||| |||||||| ||||||| ||||||| || Sbjct 290 CATGTTCTTTCTGCGGCCTATGCCGGCCGACGTCGAGGTTCTCAACGACGTCAACGGAGA 231 Query 22349 GCTGGTGAACCTGTATCGCGTCGTTCAGCACCATCTCGAAGAGTTCGTGCGTCAGTTCAA 22408 ||| | ||||| ||||| || || |||| || || || || ||||| || |||||||| Sbjct 230 ACTGATCAACCTCTATCGGGTGGTGAAGCATCACCTGGAGGAATTCGTACGCCAGTTCAA 171 Query 22409 ATGGGCGCTGACGAGCCGGCAGGTGTTCGAGTGGCTGAAGCATACGGTCCCGGAAACCCT 22468 |||||||||| ||||||| ||||||||| | ||||| || || ||| ||||| Sbjct 170 ATGGGCGCTGTCGAGCCGACAGGTGTTCAAATGGCTCCAGATCACACCTGAGGAGACCCT 111 Query 22469 CACCGACATCCAGCGTGCGGCACGCTTCTACTACCTGCA 22507 |||||||||||||| || || | |||| ||| || || Sbjct 110 GACCGACATCCAGCGGGCCGCCAGGTTCTTCTATCTACA 72 >seq188449 Length=255 Score = 197 bits (218), Expect = 5e-46 Identities = 198/254 (78%), Gaps = 10/254 (4%) Strand=Plus/Minus Query 31101 GACCCAAGCAGCGGCTCCATCGACAGGAAGCGTACGCGCGCGGGTACTGCGAGCAGCTTC 31160 |||||| |||| |||||||| || |||||||| |||||||| || | || ||||||||| Sbjct 247 GACCCA-GCAGGGGCTCCATGGAGAGGAAGCGCACGCGCGCAGGCAAGGCCAGCAGCTTC 189 Query 31161 GGGATGTCGCGGTCGGCCTCTTCCTGGTTGACGATCGTCGCGCCGATCCAGACGTTATCC 31220 |||||||||||||||||||| ||||||| ||||||||| || | ||| ||||| || Sbjct 188 GGGATGTCGCGGTCGGCCTCGCTCTGGTTGGTGATCGTCGCACCCAGCCAAACGTTGTCA 129 Query 31221 GGCAG---TCGGTCGATTCCGATCTCGCGTAGCATCGCCGCGACGTTGCCGATGCGCTTC 31277 ||||| || | ||| ||| | | |||||| | ||||||||||||||||| Sbjct 128 GGCAGCCATCCGGGGAT---GAT---GGCCACCATCGCGGGCACGTTGCCGATGCGCTTG 75 Query 31278 GTCAGCAACAACCAGTCGAGGTTTGGCGTGTCGGCGATCAGGCGGAACAGGTCCGCGCGC 31337 ||||||| |||||| || || || || |||||| ||| ||| ||| ||||| |||||| Sbjct 74 GTCAGCAGCAACCAATCCAGATTGGGTGTGTCGCGGATGAGGGCGAAGAGGTCGGCGCGC 15 Query 31338 CACGCCGGATCGAC 31351 ||| ||||||||| Sbjct 14 CACTGCGGATCGAC 1 >seq194231 Length=202 Score = 154 bits (170), Expect = 5e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22383 CTCGAAGAGTTCGTGCGTCAGTTCAAATGGGCGCTGACGAGCCGGCAGGTGTTCGAGTGG 22442 || || || ||||| || |||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 3 CTGGAGGAATTCGTCCGCCAGTTCAAGTGGGCGCTGACCAGCCGGCAGATGTTCAAGTGG 62 Query 22443 CTGAAGCATACGGTCCCGGAAACCCTCACCGACATCCAGCGTGCGGCACGCTTCTACTAC 22502 | ||| | ||| || || || || || || || ||||| ||||| |||||||||||| Sbjct 63 CAGAAAGAAACGCGGCCCGAGACGCTGACTGATATTCAGCGGGCGGCCCGCTTCTACTAC 122 Query 22503 CTGCAAAAAAGTTGCTTTGGCGGGAAGCTTGAAGGGCAGACGTTCGGAACGGCGACGACT 22562 ||| | | ||||| |||| ||||| || || ||||||||||| || || ||||| Sbjct 123 CTGATGCAGAACTGCTTCAGCGGCAAGCTGGAGGGTCAGACGTTCGGCACCGCAACGACG 182 Query 22563 ACGGTGCCGGGCCTGAACCT 22582 || |||||| |||||||| Sbjct 183 GCGCCGCCGGGGCTGAACCT 202 >seq200661 Length=255 Score = 149 bits (164), Expect = 2e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 22174 TCACAA-TGGCAAATCCCATTATTCCCTGGATCGGCGGCAAGCGTCGACTCGCTGACCAC 22232 |||||| ||||||| || || ||||||||| | || |||||||| || || || ||| | Sbjct 24 TCACAAGTGGCAAAACCGATCATTCCCTGGCTGGGTGGCAAGCGCCGCCTGGCCGACAAG 83 Query 22233 ATCATCCCGCGCTTTCCGAAGCACGACTGTTACGTCGAGGTGTTCGCGGGCGGGGCGGC- 22291 || | || | ||||| ||||| ||| ||||||||| ||||||||||||||||| Sbjct 84 ATTCTTCCCCTTTTTCCCAAGCATTCCTGCTACGTCGAGCCATTCGCGGGCGGGGCGGCA 143 Query 22292 --GCTGTACTTCATGCGACCGCCAGCCAGGGTCGAGGTGATCAACGATATCAACGGCGAG 22349 ||| | | || | ||| |||| ||| |||||| | ||||| ||||||||||| Sbjct 144 TTGCTTTTCGCCAGGTCGGAGCCGGCCAAGGTGGAGGTGCTGAACGACATCAACGGCGAC 203 Query 22350 CTGGTGAACCTGTATCGCGTCGTTCAGCACCATCTCGAAGAGTTCGTGCG 22399 ||||| |||||||| || || || || ||||| || || || ||||| || Sbjct 204 CTGGTCAACCTGTACCGGGTAGTGCAACACCACCTGGAGGAATTCGTCCG 253 >seq63993 Length=1130 Score = 141 bits (156), Expect = 3e-29 Identities = 233/333 (70%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 22635 TACATCGAGCGGCTCGATTGGGCGACCTGCATCGATCGTTACGATCGGCCGCACACGCTG 22694 ||| |||||| ||||||||||||| | ||||| || || ||||| ||||||||||| || Sbjct 12 TACGTCGAGCAGCTCGATTGGGCGGCGTGCATTGACCGCTACGACCGGCCGCACACACTC 71 Query 22695 TTCTACCTTGATCCGCCGTACTTCGAGACTGAAGGGTACGGCGTCGCATTCCCTTTCACG 22754 |||||| ||||||||| |||| |||||||| ||||||||||| | || |||| Sbjct 72 TTCTACGCTGATCCGCCCTACTGGGAGACTGAGGGGTACGGCGTGCCGTTTCCTTGGGAA 131 Query 22755 GAGTACGAGAAGATGGCCGAGCGGCTGCGGTCGATCAAGGGGCGCGCGATCGTCAGCCTC 22814 |||||||| |||||| | ||| |||||||||| || | |||||| || Sbjct 132 CAGTACGAGCTGATGGCGGCCAAGCTCAAAACGATCAAGGGCAAAGCAGTGGTCAGCATC 191 Query 22815 AACGACCATCCGGAGATCCGGCGCGTG-TTCGCCGGTTTCCATATCGAGAGCGTGCCGAT 22873 || || || || | ||||| | | ||| ||| | ||| | || ||| | | | Sbjct 192 AATGATCACCCTGCGATCC-GAGAGTGCTTCAGGGACTTCGACATGGAGGCTCTCAAGCT 250 Query 22874 TCAGTACAC---GATAGGCGGCGGGAAGGGCGTCGAGCGCCGCGAGCTGATCATTTTCAG 22930 | ||||| | || |||| || | ||||||||| |||||||| |||| | ||| Sbjct 251 GGACTACACCGTGGGTGGGGGCGCCAATCGTGTCGAGCGCGGCGAGCTGGTCATCTACAG 310 Query 22931 TTGGGACGATGCGGCGCAGCCAGTCGGGCTGTT 22963 |||| || | ||| |||||| || ||||| Sbjct 311 TTGGAACAGGGAGGCAGAGCCAGCAGGCCTGTT 343 >seq149116 Length=413 Score = 138 bits (152), Expect = 4e-28 Identities = 287/421 (68%), Gaps = 16/421 (4%) Strand=Plus/Plus Query 17341 AAGTGGGCGCTGTACGCAATCGCGCGTTACTGCGACGAACTCGTGTCCGACGGGAAGGGC 17400 ||||||| |||||| |||| || || |||||||| | || ||||| ||| Sbjct 1 AAGTGGGGCCTGTACCAGATCGGCCGCTATTGCGACGAGATGGTCGATGACGGCTTCGGC 60 Query 17401 GGCAAGGAGCCGTGCTTCACCTGCAAC---TGCGTGCTTCAGACGCGCGCGGACGCATTC 17457 || ||||| ||| |||||||||||||| | | ||| ||| || || ||||| | | Sbjct 61 GGAAAGGAACCGCGCTTCACCTGCAACGTCTACCTGCAACAGGCG---GCCGACGCCTAC 117 Query 17458 AAGGTGGTACAGGATCTCGCGAGCGTCTTTCGCGGCATTTCGTACTGGGGCGCCGGGTCG 17517 |||||| ||||| |||| | | || |||||||| | || |||| | || | Sbjct 118 CGGGTGGTGCAGGACTTCGCCTCCATTTTCCGCGGCATGGCTTATTGGGCCAACGCCGCC 177 Query 17518 GTGGTCGCGTCGGCCGATATGCCGTCCGATCCGGTCTACCTGTACACGGCCGCGAATGTC 17577 ||| |||| |||||||| |||||| ||||||||||||| || | || | || || || Sbjct 178 GTGTTCGCCTCGGCCGACATGCCGGGCGATCCGGTCTACACGTTCTCGTCGGCCAACGTG 237 Query 17578 GTCGGTGGTTCATTCAAGTACGTCGGCAGCGAACGCAAGACGCGTTACACGGTCGCGCTC 17637 |||| ||| ||||| ||||||||| | | | ||||| ||||| || ||||| Sbjct 238 GTCGATGGCCGCTTCAACTACGTCGGCTCGGCGCTGACCACGCGCTACACCGTGGCGCTG 297 Query 17638 GTCAGCTACAACGA----TCCGACGAACCAGT-ACAAGCAAGCTGTCGAGCCCGTGCAGG 17692 || || ||||| ||||| || || | || ||| |||||| ||| || Sbjct 298 GTGTCCTGGAACGACATGTCCGA--AATGGGTCGCCAG-AAG--GTCGAGTACGTCGAGA 352 Query 17693 ACGACGACGGGATCGCGCGATATGGCGTCATCAAGACGGAGGTCACGGCGTTCGGCTGCA 17752 || ||| || |||||||| ||||| || || ||| || || | ||||||||||| Sbjct 353 ACCGCGAAGGCATCGCGCGCTATGGAATCCAGCAGGTGGAAGTGACCGGGTTCGGCTGCA 412 Query 17753 C 17753 | Sbjct 413 C 413 >seq55791 Length=415 Score = 132 bits (146), Expect = 2e-26 Identities = 268/394 (68%), Gaps = 4/394 (1%) Strand=Plus/Minus Query 22547 CGGAACGGCGACGACTACGGTGCCGGGCCTGAACCTGCTGCGCATCGAAGAAGAGCTATC 22606 ||| || || ||||| || |||||| ||||||||||| || | |||||| | | || Sbjct 415 CGGCACCGCAACGACGGCGCCGCCGGGGCTGAACCTGCTCCGGCTGGAAGAAACGTTGTC 356 Query 22607 GGCGGCGCACATTCGTCTCGCGAATGCGTACATCGAGCGGCTCGATTGGGCGACCTGCAT 22666 || || ||| |||| || ||| | ||| | |||| || ||| | ||| | Sbjct 355 CGCAGCCCACCTTCGCCTGGCGCGTATCTACGTGGAGCATCTGCCCTGGCTGGATTGCGT 296 Query 22667 CGATCGTTACGATCGGCCGCACACGCTGTTCTACCTTGATCCGCCGTACTTCGAGACTGA 22726 | || ||||| ||||||||||||| |||||| | || ||||| |||| || || | Sbjct 295 GAAGCGCTACGACAGGCCGCACACGCTCTTCTACATGGACCCGCCCTACTGGGACACGGC 236 Query 22727 AGGGTACGGCGTCGCATTCCCTTTCACGGAGTACGAGAAGATGGCCGAGCGGCTGCGGTC 22786 || ||||| || | |||| || | |||||| | |||||| || ||||||| Sbjct 235 CGGCTACGGAGTGGAATTCGGCATCGAGCAGTACGCGGCGATGGCTGATTCCATGCGGTC 176 Query 22787 GATCAAGGGGCGCGCGATCGTCAGCCTCAACGACCATCCGGAGATCCGGCGCGTGTTCGC 22846 ||| || || |||||| | |||||| |||| ||||||||| |||| || | ||||| Sbjct 175 GATGAAAGGTCGCGCGCTGGTCAGCGTCAATGACCATCCGAAGATGCGCGAAGCCTTCGC 116 Query 22847 CGG--TTTCCATATCGAGAGCGTGCCGATTCAGTACACGATAGGCGGCGGGAAGGGCGTC 22904 ||| ||||||| | | || || || | ||||| | ||||| || |||||| Sbjct 115 CGGCTTTTCCAT-GCAGGTGC-TGGACATCCGCTACACCGTCGGCGGGGGCGGGGGCGTG 58 Query 22905 GAGCGCCGCGAGCTGATCATTTTCAGTTGGGACG 22938 |||| ||||||| | ||| || |||| || Sbjct 57 CCGCGCGCCGAGCTGCTGATTCAGAGCTGGGCCG 24 >seq201839 Length=207 Score = 109 bits (120), Expect = 2e-19 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 22165 AAACGGCTTT-CACAATGGCAAATCCCATTATTCCCTGGATCGGCGGCAAGCGTCGACTC 22223 ||||| ||| || ||||||| |||||| ||||| ||| ||||||||||||| || || Sbjct 3 AAACGAATTTACAAAATGGCATCTCCCATCATTCCGTGGCTCGGCGGCAAGCGCCGCCTG 62 Query 22224 GCTGACCACATCATCCCGCGCTTTCCGAAGCACGACTGTTACGTCGAGGTGTTCGCGGGC 22283 || |||| | | ||| || || ||| | || || |||||| |||||| ||| Sbjct 63 GCCGACCGTCTGCTTCCGTATTTCCCACCCCACCAGTGCTATGTCGAGCCGTTCGCCGGC 122 Query 22284 GGGGCGGCGCTGTACTTCATGCGACC---GCCAGCCAGGGTCGAGGTGATCAACGATATC 22340 |||||||| ||| |||| |||| || | | ||| || || || ||||||| || Sbjct 123 GGGGCGGCCATGTTCTTCCTGCGGCCCATGGCGGCCGACGTTGAAGTACTCAACGACGTC 182 Query 22341 AACGGCGAGCTGGTGAACCTGTA 22363 || ||||||||| | |||||||| Sbjct 183 AATGGCGAGCTGATAAACCTGTA 205 >seq145634 Length=321 Score = 102 bits (112), Expect = 3e-17 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 16176 GCACATCGCTGATGGGGCTCGGCGCGTCGATGGCGCTGGGCGGCATCGTGCAGATGCTCA 16235 |||| ||||||||| | ||| | ||||| ||||||||||| | |||||| |||||| Sbjct 97 GCACCTCGCTGATGACCATGGGCCTGGCGATGACGCTGGGCGGCGTGGTGCAGTTGCTCA 156 Query 16236 GTCC---GCAACAGGCCGGCCTCG-CGGGGACGG--CGAACAACGGCACGTCGTACTACT 16289 || ||||| |||| || | |||||| | |||||||| |||||||| ||| Sbjct 157 CGCCACAGCAACGGGCCCTGAGCGTCAAGGACGGGCCCGACAACGGCGCGTCGTACAACT 216 Query 16290 TCAACGGACCCGTGAACAGCGCTGCGCAGGGCGAGCCGGTGCCGCTCGTCATCGGCGAAA 16349 ||||||| || || |||| | | ||||||||| | || |||||| | | ||||| | Sbjct 217 TCAACGGCCCGGTCAACACCACGGCGCAGGGCAACCCCGTGCCGGTGCTGTATGGCGAGA 276 Query 16350 TGGTCGTCGGC 16360 || |||| ||| Sbjct 277 TGTTCGTGGGC 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 174964532734164