Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_005882.1 Length=36748 Score E Sequences producing significant alignments: (Bits) Value seq33725 141 2e-29 seq108306 127 5e-25 seq74324 127 5e-25 seq201347 125 2e-24 seq188774 125 2e-24 seq143013 116 9e-22 seq188410 104 5e-18 seq44780 100 7e-17 seq188508 89.7 1e-13 seq33707 87.8 4e-13 seq49420 82.4 2e-11 >seq33725 Length=904 Score = 141 bits (156), Expect = 2e-29 Identities = 206/288 (72%), Gaps = 10/288 (3%) Strand=Plus/Plus Query 13485 GCGCCGCGAATCGCTGCGCTGGTATCTGATTCTGGCG---CTGTACAACGCGCGGCCCGA 13541 |||||||||||||||||||||| ||||||||| | ||| ||||||| || ||| Sbjct 383 GCGCCGCGAATCGCTGCGCTGG---CTGATTCTGTTGACCCTGAACAACGCACGCCCCAT 439 Query 13542 GGAAGTCGTCGAGGACGTGATCCAGATGACGATGCGC--TCGATCTTCGCCGACATCACG 13599 | | | |||||| | ||||| | | | ||| | ||| | | | || |||| Sbjct 440 CGGCGCCTTCGAGGGCCCGATCCTGTCG--GTTGCCCAATCGGAGTACCCGGATGCCACG 497 Query 13600 GCGCTTGAGGTGCGCAAGGAACTGGACTACCTCGCCGATCGCGTGCTGGTGAAGCTGCGC 13659 |||| || ||||| || || |||||||| | || |||| ||||| || ||| Sbjct 498 CCGCTGGAATTGCGCCGTGAGCTCGACTACCTGTCGGACCGCGACCTGGTCAAACTGGAG 557 Query 13660 AAGGAACCGTCCGGCCGCTGGTGGGGCGATCTCACGCGCTACGGCGTCGACATCGCCGAG 13719 ||| ||| |||| |||| | |||||||||||||||||| |||| | ||||| Sbjct 558 AAGCGCCCGGACGGCAAGTGGTTCGCGGATCTCACGCGCTACGGCACCGACGTGGCCGAA 617 Query 13720 TACACGATCGATTGCGAGCCGGGCATCGCGCGGCCGGCCAAGTACTGG 13767 ||||||||||| || ||||| |||||||| ||||| | |||||||||| Sbjct 618 TACACGATCGACTGTGAGCCTGGCATCGCCCGGCCCGTCAAGTACTGG 665 >seq108306 Length=845 Score = 127 bits (140), Expect = 5e-25 Identities = 320/480 (67%), Gaps = 26/480 (5%) Strand=Plus/Plus Query 13299 TGGAGCGCGATTTTCTGCGATTTCAGGCGGACCTACCGCTGCAGTACGTGCGCCGCGAAG 13358 |||| ||||| || |||| | ||| ||| | |||||||||||||||| || || | Sbjct 201 TGGAACGCGAGTTCCTGCAGATGCAGCGTGACATGGCGCTGCAGTACGTGCGACGTGAGG 260 Query 13359 ACTACGTGCGCAACCAGACCGTCATCGAAGCCAAGCTCGACGCGATCGCGCTCAGATTCG 13418 ||||| | || || | ||| |||| || ||||| || | | ||| | | ||| Sbjct 261 ACTACATCCGTGGTCAAAGCGTGGTCGAGGCGAAGCTGGATGGCTTGGCGGTGAAGATCG 320 Query 13419 AAAACTTACAACTCCGGGGA--AATCAATG--ACGCCCACCAATCCGCTGGGAATCGACC 13474 ||||| | || || |||||| | | ||| | | | ||| | ||| |||| Sbjct 321 AAAACCTGCAGCTGCGGGGAGTATTGGATGGAAAG---AAAAATGCA-----AATTGACC 372 Query 13475 ACGCCAAGGTGCGCCGCGAATCGCTGCGCTGGTATCTGATTCT---GGCGCTGTACAACG 13531 ||| |||||||||||||||||||||| ||||| || | | ||| |||||| Sbjct 373 TGGCCCGCTCGCGCCGCGAATCGCTGCGCTGG---CTGATCCTCTTGACCCTGAACAACG 429 Query 13532 CGCGGCCCGAGGAAGTCGTCGAGGACGTGATCCAGATGACGATGCGCTCGATCTTCG--- 13588 | || || | | | | || | | ||| | || || || |||| ||| | Sbjct 430 CACGTCCGATCGGCGCCTTTGAAGGCCCGATTC---TGTCGGTG-GCTCAATCCGAGTAT 485 Query 13589 -CCGACATCACGGCGCTTGAGGTGCGCAAGGAACTGGACTACCTCGCCGATCGCGTGCTG 13647 |||| |||| | || ||| ||||| || || |||||| | | ||||||| ||| Sbjct 486 CCCGATGCCACGCCCCTGGAGCTGCGCCGCGAGCTCGACTACTTGTCAGATCGCGACCTG 545 Query 13648 GTGAAGCTGCGCAAGGAACCGTCCGGCCGCTGGTGGGGCGATCTCACGCGCTACGGCGTC 13707 || || ||| ||| || |||| |||| | |||||| ||||| |||||| Sbjct 546 GTCAAACTGGAGAAGCGTCCCGACGGCAAGTGGTTCGCCGATCTGACGCGGTACGGCACG 605 Query 13708 GACATCGCCGAGTACACGATCGATTGCGAGCCGGGCATCGCGCGGCCGGCCAAGTACTGG 13767 ||| | ||||||||||||||||| || ||||| |||||||| ||||| | ||||||||| Sbjct 606 GACGTGGCCGAGTACACGATCGACTGTGAGCCTGGCATCGCTCGGCCCGTGAAGTACTGG 665 >seq74324 Length=482 Score = 127 bits (140), Expect = 5e-25 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 3709 GTCGAGCGGGGCCAGCTCGACCATTTCGCATCGCTGCACGACTTCCCGGACGTCCTGGTT 3768 ||| ||||| | |||| || || |||||| |||||||| || || ||||| || ||| Sbjct 170 GTCCAGCGGCGGCAGCGTGATCAGTTCGCAGCGCTGCACCACCTCGCGGACTTCGGGGTC 229 Query 3769 GCGCTCGGACAGCTTGACCTTCAGCTCCGGCTGGCCGATCAGGATGATGGACAGCAGCTT 3828 |||| |||||| | ||| || |||||| | |||||||||||| |||||||| Sbjct 230 CTTCTCGCTGAGCTTGCGCGCCAGTTCGTTCTGGCCTACCAGGATGATGGAGAGCAGCTT 289 Query 3829 CTTAAATCCCATCTCCAACTCGAAGAAGCGCTTCAGGTGCTTGAGCGTCGCGATCGGCAG 3888 ||| || || ||||| |||| |||||||||||| | ||||||||| | | | | ||| Sbjct 290 CTTGAAGCCATCCTCCAGCTCGTAGAAGCGCTTCATGGCCTTGAGCGTGGGGGTAGCCAG 349 Query 3889 CGCGTGCGCTTCGTCGAT 3906 |||| ||||| ||||| Sbjct 350 GTCGTGGGCTTCTTCGAT 367 >seq201347 Length=207 Score = 125 bits (138), Expect = 2e-24 Identities = 138/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 2163 TCGGGGCGTGCGTCCGTCG-TCCAATCGCGAAGGCACTCGTCGATCATCGACTTCGCGGC 2221 |||| ||||| | || ||| |||| ||| |||||||| ||||| | | ||| ||||| Sbjct 185 TCGGCGCGTGAG-CCTTCGGTCCAGTCGTTCAGGCACTCATCGATGAGGGCCTTGGCGGC 127 Query 2222 CTGCAAGCGTTCATCGAACGCGATGCGGTCTTGGATGGCACGCTGGATGCGGTAGCGGCC 2281 ||||| ||| ||||||||| |||| ||| ||| ||| ||| |||| | ||||||| Sbjct 126 CTGCAGGCGCTCATCGAACTGGATGGTGTCCTGGCAGGCGCGCAGGATCTTGAAGCGGCC 67 Query 2282 GTCGAACGAGTACAGGGTGACGTTGCCCTTCTTGCCGCCAACCTTCGAGCCATACTCCTC 2341 ||| | || |||||| ||||||||||||| | |||||| | ||| | ||| |||| ||| Sbjct 66 ATCGTAGGAATACAGGCTGACGTTGCCCTTGTCGCCGCCGATCTTGGCGCCGTACTGCTC 7 Query 2342 G 2342 | Sbjct 6 G 6 >seq188774 Length=209 Score = 125 bits (138), Expect = 2e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 11998 GAGCTGACGCGCAACGCACGTGCCGTCTGGGGCATGGATGCGCCAGTCTCGTCGTTCGCG 12057 ||||| | ||||||||| |||| ||| ||||||||||| || || |||||| ||||||| Sbjct 203 GAGCTCATGCGCAACGCCCGTGTCGTTTGGGGCATGGACGCACCGGTCTCGACGTTCGCC 144 Query 12058 GCGCAAATCCACCAGGAGAGCCGCTGGCGCGCGGACGCCGTCAGCGTCGTTGGTGCGCGC 12117 || || ||||| ||||||||| ||||||| | | ||||||| | ||| || || | Sbjct 143 GCACAGATCCATCAGGAGAGCGCCTGGCGCCCCGGCGCCGTCTCTGCCGTGGGCGCCCAA 84 Query 12118 GGGATGTCTCAATTCATGCCCTCGACCGTCGACTGGATCGCGGG 12161 || ||| | || |||||||| ||||| | ||||||||| || Sbjct 83 GGCATGGCCCAGTTCATGCCGGCGACCTCCAGCTGGATCGCTGG 40 >seq143013 Length=312 Score = 116 bits (128), Expect = 9e-22 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 12193 CCGTTCAACCCGTCCTGGTCGATTCGTGCGCTCGTGCGGTACGACCGGCACCTCTGGGAG 12252 || ||||| ||||||||| || | || || || || |||||||| |||||| || Sbjct 20 CCTTTCAATCCGTCCTGGGCGCTGCGCGCCCTGGTCACCTACGACCGCTACCTCTACGAC 79 Query 12253 CGCATCACGGCGGCCGGTGCATGCGAGCGCATGGCGATGACGCTGTCGGCCTATAACGGC 12312 |||||| ||| | || |||||||||||||||||||| |||||||||| |||||| Sbjct 80 CGCATCCGCGCGCATGATGACTGCGAGCGCATGGCGATGACATTGTCGGCCTACAACGGC 139 Query 12313 GGCCTGGGCTGGGTCTATCGCGATCAG 12339 |||||||||||| ||| ||||| ||| Sbjct 140 GGCCTGGGCTGGATCTCGCGCGACCAG 166 >seq188410 Length=236 Score = 104 bits (114), Expect = 5e-18 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 12193 CCGTTCAACCCGTCCTGGTCGATTCGTGCGCTCGTGCGGTACGACCGGCACCTCTGGGAG 12252 || ||||| ||||||||| || | || || || || |||||||| | |||| ||| Sbjct 20 CCTTTCAATCCGTCCTGGGCGCTGCGCGCCCTGGTCACCTACGACCGCTATCTCTACGAG 79 Query 12253 CGCATCACGGCGGCCGGTGCATGCGAGCGCATGGCGATGACGCTGTCGGCCTATAACGGC 12312 || ||| ||| | || |||||||||||||||||||| |||||||||| |||||| Sbjct 80 CGTATCCGCGCGCGTGATGACTGCGAGCGCATGGCGATGACATTGTCGGCCTACAACGGC 139 Query 12313 GGCCTGGGCTGGGTCTATCGCGATCAG 12339 || ||||||||| ||| || || ||| Sbjct 140 GGGCTGGGCTGGATCTCGCGTGACCAG 166 >seq44780 Length=892 Score = 100 bits (110), Expect = 7e-17 Identities = 130/179 (73%), Gaps = 12/179 (7%) Strand=Plus/Minus Query 11570 CGCTTCCCGCGGCTGACGAGCTGGCTC---GTCGCCGC---GATCATCCTCGTTGCAGCC 11623 ||| | ||||| ||||| | ||||||| |||||||| | | ||| |||| | | Sbjct 177 CGCCTGCCGCGCCTGACCACCTGGCTCATCGTCGCCGCATTGCTGATCGTCGTGATCGGC 118 Query 11624 ATCGCGCTTTTCTCGCCGCAGCAACTGCCCGTCGCCCTCTACAAACTGAGTCTCGTCAGC 11683 |||| | || || |||||| | |||||||| |||| || ||||| || ||||| Sbjct 117 ATCG------TTTCCCCCCAGCAAGTTCCCGTCGCGATCTATAAGCTGAGCCTGATCAGC 64 Query 11684 CTCGCGGCCGTCGTCGCGTACTGGCTCGATCGCGGGCTTTTCCCGTACGCGCGGCCGGA 11742 || |||||||||| | | |||||| |||| |||| || ||||||||||| || || || Sbjct 63 CTGGCGGCCGTCGGCTCCTACTGGATCGACCGCGCCCTGTTCCCGTACGCTCGTCCCGA 5 >seq188508 Length=297 Score = 89.7 bits (98), Expect = 1e-13 Identities = 160/229 (70%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 5791 TCCGCACCCATGACGTACTCGGTGTAAATCCAGTCGCTCGCGTGGTCGGAGATTTCGTAG 5850 ||| | ||| |||||||| || || ||||| |||| | ||| |||| | ||||| Sbjct 73 TCCCCGCCCGTGACGTACGTGGAATAGTTCCAGCCGCTGGTGTGATCGGTCACCACGTAG 132 Query 5851 CTCCACACACGA-TCGGCCGCGATCCGGGCGAGGTTCTTTGGCTTGTTCTTGTAGAACTC 5909 | ||||| ||| ||| || | | || ||| ||||||||||||||||| || Sbjct 133 CGCCACAG-CGACTCGTTGATGACCTTGATGACGTTGGCCGGCTTGTTCTTGTAGAAGTC 191 Query 5910 AGCGTGATCCATCACGCGCAGGCCGTTCGCACGGGCATCGGCTACCGGCTTCAGGTAGTA 5969 | ||| ||||| | |||||| ||||| ||| | ||| | | || ||||||| | Sbjct 192 GGTGTGGTCCATGATGCGCAGACCGTTGTCAC--CCTTCGAC-GCACGCGGCAGGTAGAA 248 Query 5970 CAGCACGCACAGGCTCGCGTCGATCTGCCACACGTGATTCGGATGCAGG 6018 ||| ||||| | |||||||||||||| || || ||||| |||||| Sbjct 249 CAGGACGCAACGCGAGGCGTCGATCTGCCATACATGGTTCGGGTGCAGG 297 >seq33707 Length=1224 Score = 87.8 bits (96), Expect = 4e-13 Identities = 652/1030 (63%), Gaps = 47/1030 (5%) Strand=Plus/Plus Query 5082 CTGCGCTGGCGTATCGGCGTGCCGCCGGTAGCTTTCGCCGATCACTGCGGCAGTCTCGGC 5141 |||||| ||||| |||||||| || ||||| ||||||||||| | ||| ||||| Sbjct 41 CTGCGCGGGCGTGTCGGCGTGACGGGCATAGCTCTCGCCGATCACGGGCGCA---TCGGC 97 Query 5142 ----ATAGCCGAAATCGCCACGTACGATGAG-CG--GAACGACGAAGTACGTCTCGCGCC 5194 ||| ||||| | | || || | ||| || | ||||| ||| | |||| | | Sbjct 98 GACCATA-CCGAATTGGTCA--TAGG-TGACACGTTGCACGACCTGGTAGGCCTCGTGGC 153 Query 5195 CGTCCTCGCCAGTCAGGACCACCTGGGCGGCATCGTCACGCCACGGATTG-CGCGTGATC 5253 | || ||| | ||| || |||||| ||| || | | ||| || || ||| || | Sbjct 154 CCTCGTCGTCGCTCATCACGACCTGGACGGTGTCCTGAGCCCAGGGGTTCTCGCA-GACC 212 Query 5254 ATCAGCTTCTCGCCGACCATGACGCCCGGCACCGACGACACGTCGTATTCCTCGCCACGG 5313 | |||||||||||| || |||||| |||||||||||||||||||| || || ||| Sbjct 213 AGCAGCTTCTCGCCAACGCAGACGCCAGGCACCGACGACACGTCGTAGTCGGAACCGCGG 272 Query 5314 AACGACACGCGCAGCTTCGGCGTGACCTTCCGACTTTCCGGCGAGGCAACCGCCAATTCG 5373 | ||||||| | || | ||| || ||||||| | | ||| | | Sbjct 273 TAGCTGACGCGCAAGTGCGTGGAAACCACGCGCGACTCCGGCGCGCTGAGCGCGAGTGAC 332 Query 5374 CGGCACACATCGATCGACGGCGCCTTGATGAGTTGCTGGGCGGTAATGCGCATCCATGCC 5433 || | || | |||| | | | || | || || || ||| ||| | | Sbjct 333 CGCAGGAGCTCTGCTGCTGGCGGGGTCACCAACTGATCGGGCGTGATATGCAGCCA-GGC 391 Query 5434 TCACTACGCG---TCGCACCATGCCGGCTGTGCGTTTCAGTGGCGTTGAAGTGCATACGC 5490 | | |||| |||| || || || |||| | ||| ||||||||| | ||| Sbjct 392 GGAGT-CGCGGGTTCGCCCCGTG-CGCGTGTGGATCCGGGTGCCGTTGAAGTACCGGCGC 449 Query 5491 CAGCGTTTCGCAAGCGCGTTCAGCTCGTCGAGGCTGTTCAC---------CGGCTGAAAC 5541 || ||| | | ||||| || | || || ||||||| || |||| | | | Sbjct 450 CAACGTGCCACCAGCGCATTGATCTTCTCCAGGCTGTCGACCTTGTCTGACGGCAGCAGC 509 Query 5542 TTGAGGCCCGGTTCGAACTTGCGCTCGATGAGGTTCCGCGCGTTCTCAACCTGTCCGGTG 5601 ||| | |||||| | ||||||| ||| || | | | || || ||||| || | Sbjct 510 CGCAGGGTGGATTCGAAATCGCGCTCGGTGATGTCCTGGCCCTTTTCGACCTGGCCCTTC 569 Query 5602 GCACGGGCGTTGCCAACCTTGTGGACAATCAGCTCGATTCCGAGCGAGCGGCACAGGTTG 5661 || || | ||| ||||| || | | ||| | | || ||||||||| Sbjct 570 GCGCGCGGGTTCTTCGGCTTGTTGATCTGGACGTGGATCCGCAACGCCTTGCACAGGTTC 629 Query 5662 CGCGTCATGGACGC-CGTGTTCGCCGATCCGGCGTCGAGCATCAGAATGCGTGGCACACC 5720 || | ||| ||||| ||||| || | ||||||||||| ||| |||| || || Sbjct 630 TTGAATATCG-CGCTGGTGTTGGCCGACCCCGGGTCGAGCATCACCATGAGTGGAACGCC 688 Query 5721 GTGCAGCAGGTCGGCCCCGCCGCGCTCCTGCATAGCGTTGATGAG--CGTCGAGCAGAGG 5778 | | || | | | || | || ||||| |||| |||||| |||| | | ||| Sbjct 689 G---AACATGGCCTCACCCTCTCGGCGATGCATGGCGTCGATGAGGACGTCAACC--AGG 743 Query 5779 TTCTCGCCCGATTCCGCACCCATGACGTACTCGGTGTAAATCCAGTCGCTCGCGTGGTCG 5838 || | | || | ||| |||||||| || || |||| |||| | ||||||| Sbjct 744 TTGGTGGCGTTCTCACCGCCCGTGACGTACGTGGAATAGTTCCAACCGCTGGTGTGGTCG 803 Query 5839 GAGATTTCGTAGCTCCACACACGA-TCGGCCGCGATCCGGGCGAGGTTCTTTGGCTTGTT 5897 | | |||||| ||||| ||| ||| || | | || || |||||||| Sbjct 804 GTCACCACGTAGCGCCACA-GCGACTCGTTGATGACCTTGATGACATTGGCCGGCTTGTT 862 Query 5898 CTTGTAGAACTCAGCGTGATCCATCACGCGCAGGCCGTTCGCACGGGCATCGGCTACCGG 5957 ||| ||||| || | ||| ||||| | |||||| ||| | | | | | | | | | Sbjct 863 CTTATAGAAGTCGGTGTGGTCCATGATGCGCAGACCGCT---ATCGCCCTTCGATGCGCG 919 Query 5958 CTTCAGGTAGTACAGCACGCACAGGCTCGCGTCGATCTGCCACACGTGATTCGGATGCAG 6017 ||||||| |||| ||||| | || ||||||||||| || || ||||| ||||| Sbjct 920 TGGCAGGTAGAACAGGACGCAACGCGATGCATCGATCTGCCATACATGGTTCGGGTGCAG 979 Query 6018 GCT-TGCCAGTTCAGTCACTGGGGCCGGTGCGAGCAGTTGGTCGGGATGGACGCCATACA 6076 ||| || | ||| | | || ||||| ||||||||||| || || || | | ||| Sbjct 980 GCTGCGCAGGCTCA-TTGCCGGCGCCGGCGCGAGCAGTTGCTCCGGGTGCAGACGATAGT 1038 Query 6077 TGCGTAGCGC 6086 |||| || || Sbjct 1039 TGCGCAGGGC 1048 >seq49420 Length=746 Score = 82.4 bits (90), Expect = 2e-11 Identities = 124/172 (72%), Gaps = 6/172 (3%) Strand=Plus/Plus Query 1585 TCGACGATTACTTGACGGCGTCCTTCAGCCCCTTGCCGGCCTTGAACTTCGGGGCTTTCG 1644 ||| | |||| ||||||||||||||||| ||||||| | ||||||||| | || | Sbjct 8 TCGTCAATTAGTTGACGGCGTCCTTCAGGGCCTTGCCCGGACGGAACTTCGGCACCTTGG 67 Query 1645 AC-GCTGGAATCTTGATTTCTTCGCCGGTGGCGGGATTCCGTCCGGTACGGGCGGCCCGC 1703 | || | |||||||| |||||| ||| ||||| || ||||| || || | ||| Sbjct 68 CCTTCTTG-ATCTTGATGGTTTCGCCCGTGCGCGGATTGCGGCCGGTGCGAGCAG--CGC 124 Query 1704 GCGCCCACGCTGAATAC--GCCGAATCCCGTCAGCGTCACCGTGTCGCCCTT 1753 | ||| || | | | || |||||| ||| ||| || ||||| ||||||| Sbjct 125 GAGCCGACACGGCAAACGTGCCGAAGCCCACCAGGGTGACCGTACCGCCCTT 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117149360655720