Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq74277 91.5 6e-14 seq64117 91.5 6e-14 >seq74277 Length=777 Score = 91.5 bits (100), Expect = 6e-14 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 3993 CTCTTCGCTGATGTCCTGCAGCCGCTCGACGCGTACGTCGGTGATCTCAAGCAGGATGCG 4052 ||| ||||||||||||||||||| ||||| ||| ||| | ||||| || || |||||| Sbjct 102 CTCGTCGCTGATGTCCTGCAGCCTCTCGATGCGCACGGCCGTGATGTCGAGAGTGATGCG 43 Query 4053 GGAGGCCCAACGCGGCATATGGATGCTCGGCCGCCAGCGC 4092 | | ||||| || || || |||||||| || |||||| || Sbjct 42 GCATGCCCAGCGGGGAATGTGGATGCTGGGGCGCCAGGGC 3 >seq64117 Length=1006 Score = 91.5 bits (100), Expect = 6e-14 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 4382 AGTCGGGCTGCGGCTTCACCACTCGGCGGGTGACCGTCTTCCTACCTTCCAGGATGGCGC 4441 |||| |||||||||||||| || ||||| || |||||| | ||| | || | |||| Sbjct 966 AGTCAGGCTGCGGCTTCACGACGCGGCGCGTCTGGGTCTTCGTGCCTGCAAGCAGCGCGC 907 Query 4442 GGACCATCGGCCCGGTGAATAGGATCGGACGTTCTTTCAT 4481 ||||||||||| || |||| ||||| || ||||||||||| Sbjct 906 GGACCATCGGCGCGCTGAACAGGATTGGTCGTTCTTTCAT 867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 207911482845976