Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq30879 174 3e-38 >seq30879 Length=12587 Score = 174 bits (192), Expect = 3e-38 Identities = 409/614 (67%), Gaps = 10/614 (2%) Strand=Plus/Minus Query 193584 CATTATGGAGATCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACCT 193643 |||||||||||| | || ||| || | | || |||| | || ||| | || Sbjct 11508 CATTATGGAGATTTGACGGATTCTTCCAGCCTCATTCGTGTGGTGCAGGAAGTCAAGCCC 11449 Query 193644 GCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAG 193703 | ||| |||||||||||| |||||||||||| || ||||| ||||| ||| || Sbjct 11448 GATGAAGTCTATAATCTTGCTGCTCAAAGTCACGTGGCGGTTTCTTTTGAAGAGCCGGAA 11389 Query 193704 TATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTG 193763 ||||| | ||| ||||| ||||| || ||| |||| || |||||| ||||||| | Sbjct 11388 TATACGGCCAATTCGGATGCATTAGGTACACTTCGAATTCTGGAAGCAATTCGTATTGCG 11329 Query 193764 GGAATGGAGAAAGATGTTCGCA---TCTATCAGGCATCTACCAGCGAACTGTATGGTGGT 193820 || | ||||||| | | ||||||||||| || ||| || || || Sbjct 11328 GGTTT---GAAAGATACAACAAAATTTTATCAGGCATCGACATCCGAGCTCTACGGCCTG 11272 Query 193821 GTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTA 193880 |||| || | || | | |||||| || || || | || || || || |||| || Sbjct 11271 GTTCAAGAAATACCTCAAAAAGAAACAACGCCTTTCTACCCGCGTTCACCCTATGCCGTG 11212 Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCT 193940 || ||| |||||| ||| ||||||| || || | || | ||||| | |||| Sbjct 11211 GCTAAGATGTATGCTTACTGGATCACGGTCAACTACAGGGAAGCCTATGGCATGTACGCG 11152 Query 193941 AGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGT 194000 | || ||||| |||||||| || ||||| | | ||||| ||||| || ||||| Sbjct 11151 TGCAACGGAATTCTTTTCAATCATGAGTCTCCGATTCGCGGTGAAACATTCGTGACTCGA 11092 Query 194001 AAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATT--CTTTATCTTG 194058 |||||||| | | | | | ||| ||||| | | |||| | |||||||||| Sbjct 11091 AAGATTACGCGTGCTCTGGCGCGTATCAAGCTTGGACTGC--AAGAATGCCTTTATCTTG 11034 Query 194059 GTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGT 194118 | ||| | ||||| | || ||||| ||||| || |||||||| | |||| Sbjct 11033 GAAATATGAATGCGCTTCGCGACTGGGGTCACGCGCGTGACTATGTTGAGATGCAGTGGC 10974 Query 194119 TAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACAGTATTCTG 194178 | ||| | || ||||| | | || || | |||||||||||| ||||||||| | || | Sbjct 10973 TGATGCTACAGCAGGACAAGGCGGAAGACTTTGTGATTGCTACGGGTGAACAGCACTCGG 10914 Query 194179 TTAGAGACTTTGTG 194192 | |||| || ||| Sbjct 10913 TCCGAGAATTCGTG 10900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 805220497350160