Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq142870 140 3e-28 seq8367 116 3e-21 seq1 107 2e-18 seq7705 93.3 4e-14 >seq142870 Length=314 Score = 140 bits (154), Expect = 3e-28 Identities = 212/299 (71%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 23635 TCGTCGCCGCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTC-CCGTAGACAAA 23693 |||||| | || || |||||||||||||| || | ||||||| |||| ||||| Sbjct 304 TCGTCGGTTCTTATTTCGTCGAGTGGGGCGTTTACGGGCG-CAATTTCACCGTCGACAAG 246 Query 23694 GTGCCCGTGCCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAG 23753 | || | || || || | || |||| |||||||| | || || ||||||||| | Sbjct 245 ATCCCGGCGCAAAACCTGACCCACCTGCTGTACGGCTTTATCCCGATCTGCGGCGGCAAT 186 Query 23754 GGAATTAACGACGCTCTCAAAACCGTGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGC 23813 || || |||||| || ||| | ||||||||| |||| ||||||| || || Sbjct 185 GGCATCAACGACAGCCTGAAAGAGATCGAAGGCAGTTTCCAGGCCTTGCAGCGCTCCTGT 126 Query 23814 GCGGGCCGCGCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCG 23873 |||||||| |||||||| || || ||||||||||||| || || || || || || Sbjct 125 CAGGGCCGCGAGGACTTCAAAGTCTCGATCCACGATCCGTTCGCCGCGCTGCAAAAAGCG 66 Query 23874 CAGAAGGGAGTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGC 23932 |||||||| ||| | || ||| | || || || || ||||| || ||| ||||||| Sbjct 65 CAGAAGGGCGTGACCGCCTGGGATGACCCCTACAAGGGCAACTTCGGCCAGCTGATGGC 7 >seq8367 Length=9740059 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | || |||||||| | || | ||| |||||||| || |||||||| || Sbjct 8893217 GCCACCTCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 8893158 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||||| ||| || ||||||||||| || |||| | | |||||| || ||||| Sbjct 8893157 CAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGG 8893098 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| |||||| ||| | | || | || || ||| ||| | Sbjct 8893097 AATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAAC 8893038 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 |||| ||| | ||| || || || || || || || || ||||||||| || Sbjct 8893037 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGCCT 8892986 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || |||||||| | || | ||| |||||||| || |||||||| || Sbjct 8892989 GCCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 8892930 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || ||||||||||| ||| |||| | | |||||| || ||||| Sbjct 8892929 CAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGG 8892870 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| |||||| ||| | | || | || || ||| ||| | Sbjct 8892869 AATGCCTTCCTTGTCTTGGATTTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAAC 8892810 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || || || || || || ||||||||| Sbjct 8892809 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 8892761 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| | | |||||||| | || | ||| || || || || |||||||| || Sbjct 8893674 AGCCACCTCTGAGGCGCAGCACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAG 8893615 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || ||||||| ||| || ||||||||||| || |||| | | |||||| || |||| Sbjct 8893614 ACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAG 8893555 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 | || ||||||||||| ||| || ||| | | ||| | || || ||| ||| | Sbjct 8893554 GAATGCCTTCTTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAA 8893495 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||| || || || || ||||| || || ||||||||| || Sbjct 8893494 CCTCAAGAGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATGCCT 8893442 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || |||| ||| | || | ||| ||||| || || |||||||| || Sbjct 8893445 GCCTCCCCTCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8893386 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||| || ||||||||||| || |||| | | |||||| || ||||| Sbjct 8893385 CAGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGG 8893326 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | || | ||| || ||| || | Sbjct 8893325 AATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCACTGGGTTCAAC 8893266 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || || || || || || || ||||||||| Sbjct 8893265 CTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCATG 8893217 >seq1 Length=190651702 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 145676 ACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTC 145735 || ||||| | ||||| |||||| ||||||||||| |||| || |||||||| |||||| Sbjct 189193136 ACTATCTCTGTGCACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTGCTTTTC 189193195 Query 145736 CTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACG 145795 |||||||| | ||| ||||| |||||||| || ||||||||| ||| | ||| | | Sbjct 189193196 CTGTTGCAGGAGTCTTTGTACAGCATGTAAGGCGTGCCAGTCTCTGTCTGTGACTCGATG 189193255 Query 145796 AT 145797 || Sbjct 189193256 AT 189193257 >seq7705 Length=13065498 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 |||||||| | || | ||| |||||||| || |||||||| || || |||||| Sbjct 4578406 CGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCA 4578347 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||||||||| || |||| | | |||||| || || || || || || ||| Sbjct 4578346 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTG 4578287 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | ||| | ||||| ||| || | || | ||| | | Sbjct 4578286 TCCTGGATCTTGGCCTTGACATTCTCGATGGTATCACTGGGTTCCACCTCCAAGGTGATG 4578227 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || | || || ||||| ||||||||| Sbjct 4578226 GTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATG 4578191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470648175594240