Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq142870 141 8e-29 seq8367 100 2e-16 >seq142870 Length=314 Score = 141 bits (156), Expect = 8e-29 Identities = 213/300 (71%), Gaps = 2/300 (1%) Strand=Plus/Plus Query 57864 CGCCATCAGTTGACCAAAATTACCTTTGTAAGGTTCGTTCCAAGCCGATACTCCTTGTTG 57923 ||||||||| || || || || || ||||| || || | ||| || | || || | || Sbjct 6 CGCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTG 65 Query 57924 AGGCTTTTGTAGCGCCGCCCAAGGATCGTGTATCGTTACTTTGAAATCTTCTCGGCCTGC 57983 | ||||| ||||| || | |||||||| |||| |||||||| || || ||||| Sbjct 66 CGCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTG 125 Query 57984 ACACGAACGTTGCAACGCTTCAAAACTACCTGTAATCGTCTTT-AGACTGTCGTTGATGC 58042 ||| || || ||||| || | ||||| ||| ||| ||||| || ||||||||||||| Sbjct 126 ACAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATC-TCTTTCAGGCTGTCGTTGATGC 184 Query 58043 CATCGCCTCCGCAAATAGGCACGAAACCGTACAACAAATGAGTCAAATTGGGTACGGGTA 58102 ||| ||| ||||| || || | || ||||||| || || |||| || | | || | Sbjct 185 CATTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGA 244 Query 58103 CTTTATCAACTGGATATTTACGACCGTACACACTCCACTCCACGAAATAAGCTCCCACGA 58162 || || || | | || || ||||| || | |||||| |||||||||| || |||| Sbjct 245 TCTTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACGA 304 >seq8367 Length=9740059 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || || ||||||| | || || ||| | | Sbjct 8893446 ATGCAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 8893505 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| || ||| ||||||||||| ||||| || || || Sbjct 8893506 GACACCATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 8893565 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| ||||| || | ||||| | ||||| || || ||||| Sbjct 8893566 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 8893625 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || ||||||||||| || || | ||||| | || ||||| || |||| Sbjct 8893626 ATCCAGAAAGAATCCACCCTGCACCTGGTGCTGCGCCTCAGAGGTGGCTATTA 8893678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432106535846090