Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq142870 214 2e-50 >seq142870 Length=314 Score = 214 bits (236), Expect = 2e-50 Identities = 220/288 (76%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 52148 CGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGGCCGAGACGCCTTTCTG 52207 |||||||||||| || ||||| |||||||| || || | |||||| | ||||| ||||| Sbjct 6 CGCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTG 65 Query 52208 CGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGTCCGACCTGCCCAC 52267 || ||| |||||||| || | |||||||| |||| || || |||||| | |||| Sbjct 66 CGCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTG 125 Query 52268 GCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGCTGTCGTTGATGCC 52327 || || || ||||| || | ||||||| |||||| ||||||||||||||||||||| Sbjct 126 ACAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCC 185 Query 52328 GTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGTTCGGCAACGGCAC 52387 | ||| ||||| || || || |||||||||||||| || | |||||| || ||| | Sbjct 186 ATTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGAT 245 Query 52388 CAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGTA 52435 | || |||| || |||||| |||||||||||| ||||| || || Sbjct 246 CTTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATA 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536048948828560