Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2002 93.3 5e-14 >seq2002 Length=109662234 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| || || || | ||| |||||||| ||||| | ||| ||||| Sbjct 93264768 GAATCTTTAATGTACGTGTCAATGAGAAGACTGTACATTTCTGAATGTATATTTTCCATG 93264709 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463 ||||| ||||| || |||||||| | |||||| ||||| |||||||||||| Sbjct 93264708 GCAATCTGGAAGCCATAGAAACAACGAGCTTCTGTGATTTGCACTTCTTGA 93264658 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223 |||| |||||| |||||||| ||||| |||||| |||||||| || || |||||||| Sbjct 93266363 CCTCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACT 93266304 Query 93224 GCTGCAAATGCCACAATACGTTC 93246 ||||||||||| || | |||||| Sbjct 93266303 GCTGCAAATGCTACTACACGTTC 93266281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555250873662640