Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq142870 150 2e-31 seq7705 114 1e-20 seq8367 109 5e-19 >seq142870 Length=314 Score = 150 bits (166), Expect = 2e-31 Identities = 215/303 (71%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 49407 GCCATCAATTGACCGAAATTGCCTTTGTACGGTTCGTTCCAAGCGGACACACCTTTTTGG 49466 ||||||| || ||||| ||||| ||||| || || | ||| |||| ||| || || || Sbjct 7 GCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTGC 66 Query 49467 GGTTTTTGCAGCGCAGCCCACGGATCGTGAATAGACACTTTGAAATCGTCCCGGCCAGCG 49526 | |||||||||||| || |||||||||| || || |||||||| || || ||||| Sbjct 67 GCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTGA 126 Query 49527 CAACTTTTTTGTAATGCCTCAAAACTGCCCGTTATCGTTTTCAAACTGTCGTTAATGCCG 49586 || || || |||| |||||||| ||| ||||| |||||||| ||||| Sbjct 127 CAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCCA 186 Query 49587 TCGCCCCCGCAAATTGGCACGAAACCGTACAGCAGATGCGATAGATTTGGTGCGGGTACG 49646 | ||| ||||| || || | || ||||||||||| || | || ||| | || || | Sbjct 187 TTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGATC 246 Query 49647 CGATCGGCGGGAAACGATCGACCGTACACACCCCACTCGACAAAGTACGCAGCGACAACT 49706 ||| ||| || || ||||| || ||||||||||| || || | | |||| ||| Sbjct 247 TTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACGACT 306 Query 49707 TTG 49709 ||| Sbjct 307 TTG 309 >seq7705 Length=13065498 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || || || ||||| || ||||||| || || || | | Sbjct 4578419 GATGCAGATCTTTGTGAAGACCTTGACGGGTAAGACCATCACTCTGGAGGTCGAGCCTAG 4578478 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || || |||| || ||||| ||||||||||| ||||| || ||||| Sbjct 4578479 TGACACCATTGAGAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGATCA 4578538 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | || || ||||| ||||| ||| | || ||| ||||| | || || ||||| Sbjct 4578539 GCAAAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACTCTGTCTGACTACAA 4578598 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||| || || || |||||| | || | || |||| || | ||||| Sbjct 4578599 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGAGG 4578646 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || || || || || || |||| | || |||||| || Sbjct 4578189 AACATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAACCC 4578248 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | || || |||| || || || ||||||||||| ||||| |||||| Sbjct 4578249 AGTGATACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGAT 4578308 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || ||||| ||||| ||| | || ||| ||||| | || || ||| Sbjct 4578309 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACTCTGTCTGACTAC 4578368 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || |||||| | || | || |||| || | ||||| Sbjct 4578369 AACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGAGG 4578418 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || || || || || || |||| | || || ||| ||| Sbjct 4578647 GATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACGTTGGAGGTTGAACCCAG 4578706 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | | || || || || ||||||||||| ||||| |||||||| Sbjct 4578707 TGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 4578766 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| ||||| ||| | || ||| ||||| | || || ||||| Sbjct 4578767 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACTCTGTCTGACTACAA 4578826 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || || || ||||| | ||| | || |||| || | || ||| Sbjct 4578827 CATCCAGAAGGAGTCCACTCTCCATCTTGTCCTGCGCCTGAGGGGTGGT 4578875 >seq8367 Length=9740059 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| | || || || || |||||||||| || || ||| Sbjct 8893446 ATGCAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 8893505 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || |||||||| || || ||||| |||||||| Sbjct 8893506 GACACCATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 8893565 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || || |||||| | || || |||||| Sbjct 8893566 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 8893625 Query 22399 ATTCAAAAAGAATCCACC 22416 || || |||||||||||| Sbjct 8893626 ATCCAGAAAGAATCCACC 8893643 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| ||||| || ||| ||| Sbjct 8893218 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAACCCAGT 8893277 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || ||||||||||| || ||||| |||||||| Sbjct 8893278 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAG 8893337 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || || |||||| | || || |||||| Sbjct 8893338 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGACGCACCCTGTCTGACTACAAC 8893397 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || ||||| |||||| | || | || ||||| || | ||||| Sbjct 8893398 ATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGAGGGGAGG 8893444 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 ||||| ||||| || ||||| || || | || || || || |||| || || || || Sbjct 8892756 GTAAACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAG 8892815 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || ||| | || || | || ||||| ||||||||||| || ||||| ||| Sbjct 8892816 CCCAGTGACACCATTGAAAATGTGAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCC 8892875 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 ||||| || | || || || || ||||| ||| | || ||| |||||| | || || Sbjct 8892876 GATCAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGAC 8892935 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| || || || |||||| | || | || |||| || | ||||| Sbjct 8892936 TACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGAGG 8892988 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 8892990 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 8893049 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || ||||| ||||||||||| || ||||| |||||||| Sbjct 8893050 GACACCATTGAAAACGTGAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCCGATCAG 8893109 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || || |||||| | || || |||||| Sbjct 8893110 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 8893169 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 8893170 ATCCAGAAGGAGTCCACC 8893187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418544871500590