Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq142870 114 1e-20 seq8367 96.9 3e-15 >seq142870 Length=314 Score = 114 bits (126), Expect = 1e-20 Identities = 203/292 (70%), Gaps = 7/292 (2%) Strand=Plus/Minus Query 20449 TATTTTGTAGAATGGGGCGTTTATCCTAGACAATTTC-CCGTCGACAAGGTACCCGTTCC 20507 ||||| || || ||||||||||| | ||||||| ||||||||||| | || | | Sbjct 293 TATTTCGTCGAGTGGGGCGTTTACGGGCG-CAATTTCACCGTCGACAAGATCCCGGCGCA 235 Query 20508 CAATTTGTCTCATCTGCTATATGGCTTTGTGCCAATTTGCGGCGGAGATGGTATCAACGA 20567 || || | || ||||| || |||||| | || || |||||||| |||| |||||||| Sbjct 234 AAACCTGACCCACCTGCTGTACGGCTTTATCCCGATCTGCGGCGGCAATGGCATCAACGA 175 Query 20568 C-GCGTTAAAGTTGTCCCAGCCGGATAGTTATTTAGCTTTGCAACGTTCGTGCGCGGGCC 20626 | || | |||| || || | |||| || ||||| || || || ||||| Sbjct 174 CAGCCTGAAAGAGATCGAAGGC----AGTTTCCAGGCCTTGCAGCGCTCCTGTCAGGGCC 119 Query 20627 GAGATAATTTTAAAGTTGCCATACACGATCCTTGGGCCGCTCTACAGAAACCACAAAAAG 20686 | || | || ||||| | || |||||||| | ||||| || || ||| | || || | Sbjct 118 GCGAGGACTTCAAAGTCTCGATCCACGATCCGTTCGCCGCGCTGCAAAAAGCGCAGAAGG 59 Query 20687 GAGTATCCTCTTGGAACGAACCGTACAAAGGAAACTTTGGTCAGTTGATGGC 20738 | || || | ||| | || || ||||| || ||||| || ||| ||||||| Sbjct 58 GCGTGACCGCCTGGGATGACCCCTACAAGGGCAACTTCGGCCAGCTGATGGC 7 >seq8367 Length=9740059 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || || || || |||||| || || || ||| Sbjct 8892958 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCA 8892899 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || | ||| || || |||||||||||||| ||||| || || || Sbjct 8892898 GCGAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTC 8892839 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| |||||| ||| || || || | ||| | || ||||| ||||| || Sbjct 8892838 ACATTTTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 8892779 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 8892778 TTCACAAAGATCTGCATG 8892761 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || || || || ||||| || || || ||| Sbjct 8893642 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCA 8893583 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || |||||||||||||||||||| ||||| || Sbjct 8893582 GCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTC 8893523 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | || | || ||||| || || ||| Sbjct 8893522 ACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCAGTAAGGGTT 8893463 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || ||||| ||||||||| || Sbjct 8893462 TTCACAAAGATCTGCATGCCT 8893442 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| || || || || ||||| || || || ||| Sbjct 8893414 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCA 8893355 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || |||||||||||||| ||||| ||||| || Sbjct 8893354 GCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTC 8893295 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| ||||| ||| ||| || || | ||| | || ||||| || || || Sbjct 8893294 ACATTTTCAATAGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTC 8893235 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 8893234 TTCACAAAGATCTGCATG 8893217 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || || || || ||||| || || || ||| Sbjct 8893186 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCA 8893127 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || |||||||||||||| ||||| || || || Sbjct 8893126 GCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTC 8893067 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| |||||| ||| || || || | ||| | || ||||| ||||| || Sbjct 8893066 ACGTTTTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 8893007 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || ||||| ||||||||| || Sbjct 8893006 TTCACAAAGATCTGCATGCCT 8892986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418950125941032