Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 111 3e-19 seq2976 87.8 3e-12 >seq1 Length=190651702 Score = 111 bits (122), Expect = 3e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 244321 CCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT 244380 ||| |||||||| || |||||| || || ||| || || | ||| ||||||| Sbjct 189190930 CCCTTTGCTGACAGGAGAGCCCTCATACGTTTCGTACGGCCCTTGCTGCTCAGCCAGCTC 189190989 Query 244381 ACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCG 244440 |||||| | || || || | || || |||||||| |||||| || ||||| | ||| Sbjct 189190990 ACAGCTGGCTTCCAGAGCCCCATAATAAATGGTCTCAAAGATCTGCTGGTTCAGG-CGCT 189191048 Query 244441 G-GCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCA 244499 | |||| | | ||||||| | ||||| |||||| |||| ||||| ||||||| Sbjct 189191049 GCGCCTCGGGACTTTCAAAGGGGAACCTCATCAGGATGAAGGCGTCAGCCAGGCCCTGCA 189191108 Query 244500 CGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGC 244537 | || ||||||||||| | ||| || ||||||||||| Sbjct 189191109 CACCAATGCCGATGGGGCGGTGGCGTCTGTTGGAGCGC 189191146 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062 || |||| ||||||||| || || ||||||||||| ||| ||||| |||| | |||| Sbjct 189194391 ACTCTCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCACGCTGC 189194450 Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122 || || |||||||||||| | | || | ||| || |||| ||| | |||||| ||| Sbjct 189194451 TCTTCTTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCGAAGATGTCCAGGTGCCACGGC 189194510 Query 245123 TCCATGTAGA 245132 |||| ||||| Sbjct 189194511 TCCAGGTAGA 189194520 >seq2976 Length=93210757 Score = 87.8 bits (96), Expect = 3e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| |||| |||||| | || || || ||||||||||| ||||| | || || Sbjct 73918856 GGTGAGAGAGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCATTTGCT 73918797 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 | || || ||||| ||| ||| || |||||| ||| | || ||||| || ||||| Sbjct 73918796 GCTATATTTTGGCTGAAGAAGAGGGGCCTGATGCCTGGATTGACTTTCTCCAATGAACTT 73918737 Query 42816 ATCAGCAGGGACGAGG 42831 |||||||| || |||| Sbjct 73918736 ATCAGCAGAGATGAGG 73918721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 941609044547360