Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_009235.2 Length=48674 Score E Sequences producing significant alignments: (Bits) Value seq149116 143 8e-30 seq145634 93.3 1e-14 >seq149116 Length=413 Score = 143 bits (158), Expect = 8e-30 Identities = 288/421 (68%), Gaps = 16/421 (4%) Strand=Plus/Plus Query 18069 AAGTGGGCGCTGTACGCAATCGCGCGTTACTGCGACGAACTCGTGTCCGACGGGAAGGGC 18128 ||||||| |||||| |||| || || |||||||| | || ||||| ||| Sbjct 1 AAGTGGGGCCTGTACCAGATCGGCCGCTATTGCGACGAGATGGTCGATGACGGCTTCGGC 60 Query 18129 GGCAAGGAGCCGCGCTTCACCTGCAAC---TGCGTGCTTCAGACGCGCGCGGACGCATTC 18185 || ||||| |||||||||||||||||| | | ||| ||| || || ||||| | | Sbjct 61 GGAAAGGAACCGCGCTTCACCTGCAACGTCTACCTGCAACAGGCG---GCCGACGCCTAC 117 Query 18186 AAGGTGGTACAGGATCTCGCGAGCGTCTTTCGCGGCATTTCGTACTGGGGCGCCGGGTCG 18245 |||||| ||||| |||| | | || |||||||| | || |||| | || | Sbjct 118 CGGGTGGTGCAGGACTTCGCCTCCATTTTCCGCGGCATGGCTTATTGGGCCAACGCCGCC 177 Query 18246 GTGGTCGCGTCGGCCGATATGCCGTCCGATCCGGTCTACCTGTACACGGCCGCGAATGTC 18305 ||| |||| |||||||| |||||| ||||||||||||| || | || | || || || Sbjct 178 GTGTTCGCCTCGGCCGACATGCCGGGCGATCCGGTCTACACGTTCTCGTCGGCCAACGTG 237 Query 18306 GTCGGTGGTTCATTCAAGTACGTCGGCAGCGAACGCAAGACGCGTTACACGGTCGCGCTC 18365 |||| ||| ||||| ||||||||| | | | ||||| ||||| || ||||| Sbjct 238 GTCGATGGCCGCTTCAACTACGTCGGCTCGGCGCTGACCACGCGCTACACCGTGGCGCTG 297 Query 18366 GTCAGCTACAACGA----TCCGACGAACCAGT-ACAAGCAAGCTGTCGAGCCCGTGCAGG 18420 || || ||||| ||||| || || | || ||| |||||| ||| || Sbjct 298 GTGTCCTGGAACGACATGTCCGA--AATGGGTCGCCAG-AAG--GTCGAGTACGTCGAGA 352 Query 18421 ACGACGACGGGATCGCGCGATATGGCGTCATCAAGACGGAGGTCACGGCGTTCGGCTGCA 18480 || ||| || |||||||| ||||| || || ||| || || | ||||||||||| Sbjct 353 ACCGCGAAGGCATCGCGCGCTATGGAATCCAGCAGGTGGAAGTGACCGGGTTCGGCTGCA 412 Query 18481 C 18481 | Sbjct 413 C 413 >seq145634 Length=321 Score = 93.3 bits (102), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 16904 GCACGTCGCTGATGGGGCTCGGGGCGTCGATGGCGCTGGGCGGCATCGTGCAGATGCTCA 16963 |||| ||||||||| | || | ||||| ||||||||||| | |||||| |||||| Sbjct 97 GCACCTCGCTGATGACCATGGGCCTGGCGATGACGCTGGGCGGCGTGGTGCAGTTGCTCA 156 Query 16964 -GC--CTGCAGCAGGCC---GGCCTCGCGGGCGCGGCCAACAACGGCACGTCGTACTACT 17017 || | ||| | |||| || || || || | || |||||||| |||||||| ||| Sbjct 157 CGCCACAGCAACGGGCCCTGAGCGTCAAGGACGGGCCCGACAACGGCGCGTCGTACAACT 216 Query 17018 TCAACGGACCCGTGAACAGCGCCGCACAGGGTGAGCCGGTGCCGCTCGTTATTGGGGAAA 17077 ||||||| || || |||| | | || ||||| | || |||||| | | ||| || | Sbjct 217 TCAACGGCCCGGTCAACACCACGGCGCAGGGCAACCCCGTGCCGGTGCTGTATGGCGAGA 276 Query 17078 TGATCGTCGGC 17088 || |||| ||| Sbjct 277 TGTTCGTGGGC 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155207744615952