Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq25286 105 1e-17 >seq25286 Length=3245 Score = 105 bits (116), Expect = 1e-17 Identities = 299/455 (66%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 306442 TCCTTGCGAGTCTCATTTGATTCTACAATTGCTCCGATGATATCTTGAGGCACCCCCTCG 306501 |||||||| ||| ||| || || || || || || | || |||||||| || || Sbjct 1588 TCCTTGCGCGTCGTATTGGACTCGACGATGGCATGAATCAAATTCTGAGGCACATCC-CG 1646 Query 306502 A-AATTAGCCAGCAATTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCGTAACCGAACGA 306560 | ||||||| ||||| ||||| ||||| || || | || || | ||||| || || || Sbjct 1647 ATAATTAGCGAGCAACTGCTTGGTATCTTTCGGCAGACAGTAGCCGCCGTAGCCAAATGA 1706 Query 306561 TGGATTCGAATATCCCTGGCCAATTCGAGGTTCTAGAGTAACACCATCGATGATTTCTTT 306620 |||||| || | ||||| ||||| || || || || |||||||| | Sbjct 1707 TGGATTGTTGTAGTGCGCACCAATACGAGGATCCAGGCCGACCCCTTCGATGATCTGACG 1766 Query 306621 CGCATTCATATCATGAGACATTGCGAATGTATCTAGTTCGTTGAAGTATGCAACTCGCAT 306680 || || || | | || | |||| | || || ||||||||||| || || || ||||| Sbjct 1767 CGAATCCAAACCGTGGGTGGCTGCGTACGTGTCAAGTTCGTTGAAATACGCTACACGCAT 1826 Query 306681 TGCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCGCGAGTTCCCATCGTCAG 306740 || | ||| || || || || || || || || ||||| ||| || | | || Sbjct 1827 CGCCAAATAAGTATTTGAAAACAGCTTTACTGCTTCGGCCTCGGTAGAACTGGTGTAAAG 1886 Query 306741 AATAGGGGCAAGTGGAGTTTTA--GAACCTTCAACGAGAAGGTTTGCGAACTTAAGTGCA 306798 || || || | ||| | | |||||| || | || || || | ||| Sbjct 1887 GATCGGAACA--TCCTCTTTCAGCGCACCTTCCCGAAGCATATTGGCAAATATCTCGGCA 1944 Query 306799 CTAGGAGAATCATCTCCTACGATGATACGGGATGGATAGAGATTATCATACAAGGCTCTA 306858 | | || | || || ||||| ||||| || ||||| ||||| ||||| || || || Sbjct 1945 CGACTTGACTGCTCACCAACGATAATACGAGAAGGATAAAGATTGTCATATAACGCCCTG 2004 Query 306859 CCTTCACGCAGAAATTCTGGGGAGAAAATGATATT 306893 || || |||| ||||| || ||||||| ||||| Sbjct 2005 CCCTCCCGCAAGAATTCAGGTGAGAAAAAAATATT 2039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1099611778484100