Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq30877 89.7 2e-13 >seq30877 Length=9210 Score = 89.7 bits (98), Expect = 2e-13 Identities = 154/222 (69%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 6132 CCGCAGCCACGATGCGGATGGGCGGCGGGATCGGCTATGACTTCAGCACCCTCCGTCCTC 6191 ||||| || |||||| | |||||||| | ||||| ||||||||| ||||||| Sbjct 1 CCGCACAAACTATGCGGCTTGGCGGCGGTGTGGGCTACGACTTCAGCGTGATCCGTCCGA 60 Query 6192 GCGGCGACCTGATCCGCAAGCTCC--AGTCCCACTCCTCCGGCCCCATCAGCTTCATGCA 6249 ||| ||| || || | || | || || || |||||||||| |||||| Sbjct 61 AGGGCTCTTGGATTAGCT--CTACGAAGAGCTACGCCAGTGGGCCCATCAGCTACATGCA 118 Query 6250 CATCTTCGACGCGATCTGTAAGTGCGTCGCCTCCTCCGGCCATCGCCGCGGAGCCCAGAT 6309 ||| ||||| |||| || || |||| ||| | ||| || || || || ||||| Sbjct 119 CATATTCGATTCGATGTGCAAAACCGTCATCTCTGCGGGCTCCCGTCGTGGTGCTCAGAT 178 Query 6310 GGGGGTGATGCGCGTGGACCATCCCGACATTGAGGAGTTCAT 6351 ||||||||||||| ||||| |||||||| |||||||| Sbjct 179 GGGGGTGATGCGCTGCGACCACCCCGACATCTTCGAGTTCAT 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187084752613500