Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq27876 174 5e-39 >seq27876 Length=5349 Score = 174 bits (192), Expect = 5e-39 Identities = 239/334 (72%), Gaps = 0/334 (0%) Strand=Plus/Minus Query 25987 CAAAAACATCACCAAACACCAGTCTTAAAGCGCAAACCAATATTGCGCGAAATGGTGAGG 26046 |||| || || || |||| ||| || |||| ||||||||| ||||||||||| ||||||| Sbjct 4836 CAAAGACCTCCCCGAACAACAGCCTGAAAGGGCAAACCAACATTGCGCGAAACGGTGAGG 4777 Query 26047 CGCGTCCTGATAATTTTGGACAGGTGCGCTCATTCCCTGATTTGCTTCAGGAATCATTGT 26106 | ||||| || | || ||||||||| | | |||||| || ||||||| || ||| Sbjct 4776 CAAAGCCTGACAACTACGGCCAGGTGCGCGCGTACCCTGACCTGATTCAGGAGTCGCTGT 4717 Query 26107 TTGAATACGTCAATAATATTAAATATGCCACCGAGTTTATGAACTTTGGCCTCGGTAAGT 26166 | || |||| ||| || || || | | ||| |||| |||||||| || ||||| || Sbjct 4716 TCGAGTACGACAACAACATCAAGAAAGTCACAGAGTGGATGAACTTCGGGCTCGGCCGGT 4657 Query 26167 ATGATGTATCATCTGTGCGTTATTCTGAGTCAAATCTAGGTTCACTGGCTGGCGCTAGTT 26226 |||| || | || || | || || || || || || || | |||||||||||| | Sbjct 4656 ATGACGTCACGTCAGTAAGGTACTCAGAATCGAACCTGGGAGCGCTGGCTGGCGCTTCAT 4597 Query 26227 ACACCATTTATCAACCGGGAGAGATTATTCCGGTTGTGTATGAGCCGTATGCGTTTGATG 26286 || ||| || || || || |||| ||||||| | | ||||| || || || || | Sbjct 4596 ACCGCATCTACCAGCCAGGCGAGAATATTCCGCTGATCAATGAGGGGTTCGCTTTCGACG 4537 Query 26287 ATGTTGATGGTCAGGAGCTTTACGGGCCAAACGA 26320 | | || || ||||||||| ||||| ||||| Sbjct 4536 ACATCGACGGACAGGAGCTTCCTGGGCCGAACGA 4503 Score = 111 bits (122), Expect = 5e-20 Identities = 316/481 (66%), Gaps = 6/481 (1%) Strand=Plus/Minus Query 27289 TGCCTGATGAGCGCCTTGGGTGGTTCGACTATACATTCGATGATGAAGATAAAAGTATTG 27348 |||| ||| ||||| | |||| ||||| || ||||||||||||||||||| | | Sbjct 3546 TGCCGGATCAGCGCATGGGGTATTTCGATTACACATTCGATGATGAAGATATCTCGCTGG 3487 Query 27349 GCGAACGCCTACAGACCATCTGCGATGCGGCGCGCGTCACCGCGTTCTGGGATGATGGAG 27408 || || | ||||| ||||| |||||||| ||| || ||||||||||||| || | Sbjct 3486 GCTCTCGGATTCAGACGATCTGTGATGCGGCCACCGTGACGGCGTTCTGGGATGGCGGGG 3427 Query 27409 TGATGAGCTTCTCCCGTGATGAA--AAACGCGAATATCCTGCGACTGTATTTAATACCAG 27466 || || ||| | ||||||||| ||| ||| || | |||| ||||| || | Sbjct 3426 TGTTGTCTTTCACGCGTGATGAACGAAAACCGA--ATGCGACGACGGTATTCAACCGCGC 3369 Query 27467 AAACACGCAGAGCGACGGA-TATAAGTTAAGCTATGACATCAGTCTCCCCGGAACCTACG 27525 |||| | | |||| ||| || | | ||| ||||| | ||| || || | | Sbjct 3368 CAACATG-AAAGCGGAGGATTACAGCCTTTCCTACGACATGACTCTACCAGGTGGTTTTG 3310 Query 27526 ATGGCGTCAACGTTGAATATCGCGACCCAACAACAAACAAGCAAGCTAACGTTTACTATC 27585 |||| || | || | ||||| |||| || || || || || | | ||| | Sbjct 3309 ATGGGGTAGAGGTCAAGTATCGAAACCCGGTCACGAATAAACAGGCATTCATCCGCTACC 3250 Query 27586 GCATCACAGACAGTGGGGTAGTCGAAGGAGAACCAACGAAAGCCAAGAAATTCGACATGC 27645 | ||| | || | | | || || ||||| || || |||||||| ||||||| Sbjct 3249 GGATCGTCGGCAACACGATTGAAGAGGGGGAACCGGTAAAGGCGAAGAAATTTGACATGC 3190 Query 27646 TTTATGTTCGCAATCGCTATCAGGCTGTTGACCGGGCAATCATTGAGTGTCGAAGGTTGA 27705 | | | | |||||| || || || || |||||| | | || ||| || || Sbjct 3189 TGTTTATCCGCAATTCGTACCAAGCGCGGGATCGGGCATTGAAAGAAGTTCGCCGGCTGC 3130 Query 27706 TTTATTCACGCCGCAGCATGGAAATCAAGGCGCTTGCTGATGGCGAATGGGTTAACGTGG 27765 | ||||| |||| | ||||| || ||||| || |||||||||||||| ||||| | Sbjct 3129 TGTATTCGCGCCAAACCATGGCCATTCGTGCGCTGGCCGATGGCGAATGGGTGAACGTCG 3070 Query 27766 G 27766 | Sbjct 3069 G 3069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143645986684716