Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_010821.1 Length=316674 Score E Sequences producing significant alignments: (Bits) Value seq49204 87.8 4e-12 seq55539 86.0 1e-11 >seq49204 Length=529 Score = 87.8 bits (96), Expect = 4e-12 Identities = 121/169 (72%), Gaps = 3/169 (2%) Strand=Plus/Minus Query 197600 CGTTAATTCATACCCGCGCCATTACGCGCAGCTGCATGTCGCCATGCAGACTAGACTATA 197659 ||||| | | |||||| | |||| ||||||| || | | || |||| |||||||| Sbjct 527 CGTTATTCCTGACCCGCAGCTTTACCCGCAGCTTCAGCTTTCACTGAAGACCAGACTATA 468 Query 197660 TCTTCATCTCAGTGAGATGCTCCCCATTTCCACCCACTTGGGTGTACACCGTGATAAGCG 197719 ||||| || | | | || |||| ||||||| ||||| || |||| || |||| Sbjct 467 TCTTCCTCCCGGAGGGAGGCTCTCCATTTCGGACCACTCGGTCCTACAGGCTGGTAAGGC 408 Query 197720 GTTAGTCGTTGAACGTTCCTTACATTTCTGTAAGGCTTCGCTGCTGATT 197768 |||||||||||||||||| | | | | |||||||||||||||| Sbjct 407 CTTAGTCGTTGAACGTTCC---CCTGGGTACAGGGCTTCGCTGCTGATT 362 >seq55539 Length=845 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 168594 CATCCAGTAAGGTTTGTAAAGGCCCTTACGCATCCGCAGGAGGTCGTACGTGGACAGGAA 168653 ||||||||| || || |||||||| ||||| |||||||| || |||||| ||||| Sbjct 324 CATCCAGTACGGGGGATACAGGCCCTTGCGCATGCGCAGGAGATCCATCGTGGAGAGGAA 383 Query 168654 CTTCTTCTCATTAAGATGTTCGTCTTCTTCGCACATCCAATACCCACGAGTCTTATTGAG 168713 |||| | | | ||||||||||| ||| ||| || || || || | | || Sbjct 384 CTTCAGCGGTTCCACGGCGGCGTCTTCTTCGAACAGCCAGTAGCCGCGGGTTTCGCTCAG 443 Query 168714 AATCACATCCCAATCATAACCCATGGCTTTGAGGTCTTCGTAAAG 168758 ||||| ||||| || || ||| |||| || |||||| |||| || Sbjct 444 GATCACGTCCCAGTCGTAGCCCTTGGCCTTCAGGTCTGCGTACAG 488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1010223056018442