Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq40939 215 2e-51 seq23847 98.7 4e-16 seq188801 82.4 3e-11 >seq40939 Length=852 Score = 215 bits (238), Expect = 2e-51 Identities = 391/565 (69%), Gaps = 8/565 (1%) Strand=Plus/Plus Query 16696 CTGTATCGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATC 16755 |||||| || || | || |||||||| |||||| ||| || | || || || ||| Sbjct 1 CTGTATGAAAACGGGCGCATCACGGAAGCCGCCTGCATGGCGCAGCCGCGGCGGAAAATC 60 Query 16756 CACGATGTGCACGTCCGCATCCCGTCAGCACTGACGGAAGAAGCCCTGGAGCAGATCGGT 16815 ||||| || || ||||||| ||| | | | || ||||| ||| | |||||| Sbjct 61 CACGACGTTCATGTCCGCACACCGACCGACATCACCACGGAAGCGCTGAGACGCATCGGT 120 Query 16816 CAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGCAGCGGCTTGCTGAA 16875 || |||||||||| || || || ||| | || | ||||| ||| ||||||| | | Sbjct 121 GAGCTGTACGCCATCGAAGCCGAGATACGCGGCAGCCCGGCGGAGAAGCGGCTGTCGGTC 180 Query 16876 CGTCA-GCGAAAAACGAAACCGTTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGAT 16934 | | ||||| | || ||| | || |||| ||| | |||| | | |||| Sbjct 181 AGAAAAGCGAAGA-CGGTGCCGCGGATGCAATCGCTGTACGACTGGATCCAGAGTCAGAT 239 Query 16935 GAAGACCCTGTCGCGACACTCAGAGTTGGCGAAGGCGTTCGCGTACGCACTTAACCAGTG 16994 ||| || ||||| || ||| | ||| | |||||||||||||| || || || ||||| Sbjct 240 GAAAACACTGTCACGCCACCCGGAGATAGCGAAGGCGTTCGCTTATCTGCTGAAACAGTG 299 Query 16995 GCCGGCACTGACGTACTA-TGCGAACGATGGCTGGGTGGAAATCGACAACAACATCGCTG 17053 | || |||| ||| ||||| | ||||||| ||||||||||||||| ||||| | Sbjct 300 GAATGCGTTGACCCTCTACTGCGAGA-ACGGCTGGGCGGAAATCGACAACAATATCGCAG 358 Query 17054 AAAATGCCCTGCGGGCGGTCAGTCTGGGTCGTAAAAACTTCCTGTTCTTCGGCTCTGATC 17113 | || |||||||| | ||| ||||| || ||||||| ||||| || || ||| Sbjct 359 AGAACGCCCTGCGCGGTGTCGCGCTGGGGCGCAAAAACTGGTTGTTCGCGGGGTCAGATG 418 Query 17114 ATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGACG 17173 || || || || | ||| |||||||| |||||||| ||||||||||| |||| | Sbjct 419 CAGGCGGAGAACGTGCTGCGATACTGTACTCGCTGATCGGTACGTGCAAACTCAATGGGG 478 Query 17174 TGGATCCAGAAAGCTACCTTCGCCATGTGCTTGGCGTCATAGC--AGACTGGCCGGTCAA 17231 |||| || || || | || || | ||||| |||||| | |||||||||| || Sbjct 479 TGGAGCCGGAGAGATGGCTGCGTTACGTGCT--CAGTCATATCCAGGACTGGCCGGCGAA 536 Query 17232 CCGGGTCAGCGAACTGCTTCCGTGG 17256 ||||| |||| ||||| |||||| Sbjct 537 TCGGGTGCGCGAGCTGCTGCCGTGG 561 >seq23847 Length=8263 Score = 98.7 bits (108), Expect = 4e-16 Identities = 208/308 (68%), Gaps = 12/308 (4%) Strand=Plus/Minus Query 3749 ACGTGAAGTAATCCCCAGCCAGGTGGTAAATCCTCAATTGAAATAATTCCCGGCTCACTA 3808 |||| || ||||||||||| || | ||||| || || | ||||| || | Sbjct 1781 ACGTTCAGCAATCCCCAGCCTTCAGGCAGCTCCTCGATGCGGATCAGCCCCGGTTCGCAG 1722 Query 3809 ATAAAGAATCGCCAGTCGCCCATTCCAAGAGACGGATTTTTACGAAAACGCTTTTTTCTA 3868 || ||||| ||||| || ||||| || || || | | || || |||||||| | Sbjct 1721 ATGAAGAAGCGCCAATCCCCCATACCGAGCTCAGGTTGAATGCGGAACCGCTTTTTCCGG 1662 Query 3869 TCTGCCAACAAGTCAGCACGAGAACATTTCGCCTCTATCAGGCATGATGCTGAATTTCTG 3928 ||||| | |||||| | || || || || || || |||||||| || || ||| | | Sbjct 1661 TCTGCAAGGAAGTCACCGCGTGAGCACTTGGCTTCGATCAGGCAGGAGGCCAGATTACGG 1602 Query 3929 AATCCCATAGCATCTGGCTGTTCTCCGGTACTGGTTACA---GCTATAAAGCGGTCATGA 3985 || || || || || |||||||| |||| ||| ||| || | |||||| ||||| Sbjct 1601 AAGCCGATTGCGTCAGGCTGTTCGCCGG---TGGAGACAGCGGCAACAAAGCGATCATGG 1545 Query 3986 AAACAAACCTTGAAACCG---TTGCGCTTAAGGAACTTGTACGCAATCTGACAGAGTTCG 4042 ||| ||| ||||||| |||||| |||||| | |||||| | || ||| || Sbjct 1544 AAAGCGACCGAGAAACCGTTATTGCGC---AGGAACCGCTCGGCAATCAGGCATAGTGCG 1488 Query 4043 CGGTGTGT 4050 | ||| || Sbjct 1487 CTGTGCGT 1480 >seq188801 Length=238 Score = 82.4 bits (90), Expect = 3e-11 Identities = 125/176 (71%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 17083 CGTAAAAACTTCCTGTTCTTCGGCTCTGATCATGGTGGTGAGCGGGGAGCGCTACTGTAC 17142 || ||||||| ||||| || || ||| || || || || | ||| |||||||| Sbjct 236 CGCAAAAACTGGTTGTTCGCGGGGTCAGATGCAGGCGGAGAACGTGCTGCGATACTGTAC 177 Query 17143 AGCCTGATCGGGACGTGCAAACTGAATGACGTGGATCCAGAAAGCTACCTTCGCCATGTG 17202 |||||||| ||||||||||| |||| ||||| || || || | || || | ||| Sbjct 176 TCGCTGATCGGTACGTGCAAACTCAATGGGGTGGAGCCGGAGAGATGGCTGCGTTACGTG 117 Query 17203 CTTGGCGTCATAGC--AGACTGGCCGGTCAACCGGGTCAGCGAACTGCTTCCGTGG 17256 || |||||| | |||||||||| || ||||| |||| ||||| |||||| Sbjct 116 CT--CAGTCATATCCAGGACTGGCCGGCGAATCGGGTGCGCGAGCTGCTGCCGTGG 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198202932197388