Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq8367 87.8 1e-12 >seq8367 Length=9740059 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || ||||| || |||||||| || || | | ||||||| | || Sbjct 8893420 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGCTGC 8893361 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 |||||||| | |||| | ||| || ||| ||||| ||||||||||| || ||| Sbjct 8893360 TTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTTG 8893301 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| |||| ||||| || || ||| || || | ||| ||||| || || || Sbjct 8893300 GCCTTCACATTTTCAATAGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTA 8893241 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || ||||| Sbjct 8893240 AGGGTCTTCACAAAGATCTGCAT 8893218 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| || || | | | ||||| | || Sbjct 8892964 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGC 8892905 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||||||| | |||| | ||| || ||| ||||| ||||||||||| |||||| Sbjct 8892904 TTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATTTTG 8892845 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| |||| || || || || || || || | ||| ||||| || || ||| Sbjct 8892844 GCCTTCACATTTTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTC 8892785 Query 15154 AGAGTTTTTACAAAAATTTGCATATTT 15180 || || || ||||| || ||||| ||| Sbjct 8892784 AGGGTCTTCACAAAGATCTGCATGTTT 8892758 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||||| || | | || | || ||||| || || || || |||||||| || Sbjct 8893218 TGCCACCTCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 8893159 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | | ||||||| | || |||||||| | |||| | ||| || ||| | Sbjct 8893158 ACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAG 8893099 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||||||||| |||||| || || |||| || || || || || | Sbjct 8893098 GAATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAA 8893039 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||| || || ||||| || || ||||| || ||||| Sbjct 8893038 CCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 8892990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356384584100510