Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_011551.1 Length=39867 Score E Sequences producing significant alignments: (Bits) Value seq23847 260 3e-65 >seq23847 Length=8263 Score = 260 bits (288), Expect = 3e-65 Identities = 433/612 (71%), Gaps = 20/612 (3%) Strand=Plus/Minus Query 25685 CTTCTAAGCCGTAGGTCACTGGTTCGAATCCAGTAGGGCGTACCAATAAA-ATCAAGGGG 25743 |||||||||||||||||| ||||||||||| |||||||| ||| ||| ||||| | | Sbjct 7496 CTTCTAAGCCGTAGGTCATAGGTTCGAATCCTATAGGGCGTGCCATTAATTATCAATGAG 7437 Query 25744 TTACG-TAGTTTTGTCTC--CTAGGAATTATTTAAAAGTGCCAGATTAGTGACATCGTTT 25800 ||||| | || | | | | || ||| | |||||||||||||||||||||| | Sbjct 7436 TTACGCTCATTCTCCCACTGCAAG--ATTTTCCAAAAGTGCCAGATTAGTGACATTGCCC 7379 Query 25801 GCCAACGCCTCGTCAATTTTCTTGGCATGCTCAGTCAGGTGGCTGGGCGAAAGGTGTGCG 25860 ||||| | ||||||||||| | ||||| || || || ||| | || || ||||| || Sbjct 7378 GCCAAGACTTCGTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCA 7319 Query 25861 TAACGACGTACCATTTCGATAGATTCCCAGCCGCCCATTTCCTGCAAAACAGAGAGTGGA 25920 || || | |||||||| || ||||| ||||||||||| |||| | || ||||| Sbjct 7318 TAGCGCTGAACCATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGC 7259 Query 25921 ACACCTGATTGTATCAGCCAACTTGCCCAAGTATGTCTAAGATCATGAAAACGAAAATTT 25980 || |||| || | || |||||| ||||| ||||| | ||||| ||||| || |||| Sbjct 7258 ACGCCTGCCTGAACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCA 7199 Query 25981 TCTATTCCGG--CTCGTTTTAATGCCGCCCTCCATGCCGTATTAGAATCGACCCGCATTT 26038 |||||| | ||| ||| | | |||| || | ||| ||| |||||||||| Sbjct 7198 GTTATTCCCGCCCTCCGTTT--CCCGGTGTTCCAAGCTGAGTTATCATCAACCCGCATTT 7141 Query 26039 TTCTAATCGAATTTGTTTGTGAACCATCAGATCGCTT---TGCTGACATTGTATGTACGA 26095 | |||| | || | || ||| ||| || ||||| | ||||| || | Sbjct 7140 TCCTAACTGCCGCGGTCACTCCGCCGCCAGGTCGTTTCCGTGCTG---TCGTATGCACAA 7084 Query 26096 ATACCCATTTTTGATGATTACCCAAT-TG-TCGCGTCAGAATACAGCAAGCCGTATCGTT 26153 | || | | || || |||||| || || || || | | ||| || |||||||| Sbjct 7083 AGACGTACCGTGAGTGCTT-CCCAATCTGATCACG-CAATGTTCGGCACGCGGTATCGTT 7026 Query 26154 TAGAGCTACACCTATAGCTTTTCCCGATTTGCTGTTTTCTGGCTCTATCCAGGCAACTTT 26213 ||||| || || ||||| || |||| |||| ||| ||||| | ||||| || || || Sbjct 7025 CAGAGCAACGCCAATAGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTT 6966 Query 26214 TCTTTGCATATCAATTTGTGACCACGCTAAATTAATGATATTTGAACGACGTAACCCGGT 26273 ||||||||| |||| || |||||| | | || |||||||||||||| |||| || || Sbjct 6965 TCTTTGCATGTCAACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGT 6906 Query 26274 TGCCAGCGCAAA 26285 |||||| ||||| Sbjct 6905 TGCCAGGGCAAA 6894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127102748176428