Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_011802.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq23847 159 9e-35 >seq23847 Length=8263 Score = 159 bits (176), Expect = 9e-35 Identities = 352/516 (68%), Gaps = 15/516 (3%) Strand=Plus/Minus Query 3156 GTCAATTTGTCGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCTGCGAAC 3215 |||||||| || |||||||| || || || |||| | || |||||||| | |||| Sbjct 7367 GTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAAC 7308 Query 3216 CATTTCGATAGACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTG 3275 |||||| || |||||| || |||||||| |||| | |||||| || ||||| ||||| Sbjct 7307 CATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCTG 7248 Query 3276 AACTAACCAGCTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCTGC 3335 ||| ||||| || |||||||| |||| ||| || ||||| ||||| || || || || Sbjct 7247 AACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCGC 7188 Query 3336 --TCGTTTTAATGCTGACCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACA 3393 || ||| | || |||| || | ||| | ||| ||||| ||||| ||| | Sbjct 7187 CCTCCGTTTCCCGGTGT--TCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAACTGCC 7130 Query 3394 G--GTGATTTAGTTCCGTCTGGCTTGGTGC--TGCTTTCCTTGTAGACGAACACCCATTT 3449 | || | | | ||| | || | | | | |||| || | | || || || | Sbjct 7129 GCGGTCACTCCG--CCGCCAGG-TCGTTTCCGTGCTGTCGTA-TGCACAAAGACGTACC- 7075 Query 3450 GTGA-TGATTGCCTATTTGCTTTTTCAGCACCCGGCAAGCAGTATCATTCAGCGCCACGC 3508 |||| || || || || || | || ||||| || ||||| ||||| || |||| Sbjct 7074 GTGAGTGCTTCCCAATCTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGAGCAACGC 7015 Query 3509 CAATGGCCTGATTGGACTTACTTTGTTCCGGGTGTATCCATGCCACCTTTCGCTGCATGT 3568 |||| |||| | | || | || ||||| |||||||||||||||| ||||||| Sbjct 7014 CAATAGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTTTGCATGT 6955 Query 3569 CTATCTGCTGCCACTCCATATTGATAATGTTAGACCGCCTTAAGCCAGTAGAAAGCGCAA 3628 | | |||| |||||| | || ||| || || || || | || |||||| | || |||| Sbjct 6954 CAACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAGGGCAA 6895 Query 3629 ACTCTACGACTGACTTTAGCGGTTCCGGGCATTCAT 3664 | | || || | | | | | ||||| ||||| ||| Sbjct 6894 AAACGACAACGGGCCTAAACTGTTCC-GGCATGCAT 6860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133721320064196