Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq23847 260 4e-65 >seq23847 Length=8263 Score = 260 bits (288), Expect = 4e-65 Identities = 511/746 (68%), Gaps = 16/746 (2%) Strand=Plus/Minus Query 21601 CTTCTAAGCCGTGGGTCGCAGGTTCGAATCCTGCAGGGCGCACCATTATATATCAACTGG 21660 |||||||||||| |||| ||||||||||||| |||||| |||||| |||||| | Sbjct 7496 CTTCTAAGCCGTAGGTCATAGGTTCGAATCCTATAGGGCGTGCCATTAATTATCAATGAG 7437 Query 21661 TTACGCCTCTTTAATTCCCTCCTT-ATTTTCCATATGGGACATATTTGTGACATCATCAC 21719 |||||| || || | || | |||||||| | | | || ||| ||||||| | Sbjct 7436 TTACGC-TCATTCTCCCACTGCAAGATTTTCCAAAAGTGCCAGATTAGTGACATTGCCCG 7378 Query 21720 TGAAAATCGAGTCAATTTGCTTCGCGTGTTCCGTTAAATGATTCGGCGCAAGGTGAGCAT 21779 || | |||||||| |||| ||||| |||| ||| | || | |||||||||| Sbjct 7377 CCAAGACTTCGTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCAT 7318 Query 21780 ATCGGCGCACCATATCGATGCTCTCCCATCCTCCCATTTCCTGCAGAACAGAAAGCGGCA 21839 | || | ||||| || |||||||||||||| |||||||| ||||| | ||||| |||| Sbjct 7317 AGCGCTGAACCATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCA 7258 Query 21840 CTCCGGACTGAATTAGCCAACTGGCCCACGTGTGCCTCAGATCGTGGAAACGGAAATCCT 21899 | || | ||||| | |||||| |||||||| |||| ||||||||| || |||||||| Sbjct 7257 CGCCTGCCTGAACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAG 7198 Query 21900 CAATTCCAGCCCGGCGGCAAGCTGCATTCCATGCTCTCTGGTCATCGACGCGCATCTTTC 21959 ||||| |||| || | | ||||| ||| | ||||| || ||||| || | Sbjct 7197 TTATTCCCGCCCTCCGTTTCCCGGTGTTCCAAGCTGAGTTATCATCAACCCGCATTTTCC 7138 Query 21960 TGATAGTCGGAGTCTTTGAGCCATCGGGCCGGATGCCTTCTTTCGTATGCACGAACACCC 22019 | | | || ||| | ||| | || || | | | || |||||||||| || || Sbjct 7137 TAACTGCCGCGGTCACTCCGCCGCCAGGTCGTTTCCGTGCTGTCGTATGCACAAAGACGT 7078 Query 22020 ATTTATGA-TGCTTACCAATCTGTTCACGCAATACCTTACAGGCAGTGTCATTTAGCGCT 22078 | ||| ||||| |||||||| ||||||||| || || || || || || || Sbjct 7077 A-CCGTGAGTGCTTCCCAATCTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGAGCA 7019 Query 22079 ACGCCAATAGCGCGGTTTGACTTGCTGTCTTCAGGGTTCACCCAGGCAACACGACGTTGC 22138 ||||||||||| | ||| || || |||| | ||| || || | |||| Sbjct 7018 ACGCCAATAGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTTTGC 6959 Query 22139 ATGTCAATCTGTTGCCATTCCATATTGATGATGTTAGACCGCCTAAGTCCTGTTGCCAGC 22198 ||||||| ||| ||| || | || |||||| || || || | || || |||||||| Sbjct 6958 ATGTCAACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAGG 6899 Query 22199 GCAAATTTAACAACAGATTTCAACGGTTCAGG---GCA-TTCATCAATCAGGCGTTTTGC 22254 ||||| ||||| | | ||| |||| || ||| || |||||| || | || Sbjct 6898 GCAAAAACGACAACGGGCCTAAACTGTTCCGGCATGCATTTGATCAATGTGG----TCGC 6843 Query 22255 CTCTTCTTTCTCCAGCCATCTGACGCGTTTGTTTCTGACGGCT--GGAACCTTGATTACA 22312 |||||| || |||||| |||||||| ||| | || || | || || || || Sbjct 6842 CTCTTCCTTTGTCAGCCACCTGACGCGCTTGCT--TGCAGGTTTCCTTACTTTAATCACC 6785 Query 22313 GGCGCTTTCTCCAGCCATTTCCAGTC 22338 |||||||| |||||| ||||| || Sbjct 6784 GGCGCTTTTCGCAGCCACTTCCATTC 6759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137151872031096