Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq33712 262 1e-65 seq194231 167 6e-37 seq200661 149 2e-31 seq201839 125 2e-24 seq55791 118 3e-22 seq149116 111 4e-20 seq145634 93.3 1e-14 seq63993 82.4 2e-11 >seq33712 Length=1189 Score = 262 bits (290), Expect = 1e-65 Identities = 311/417 (75%), Gaps = 6/417 (1%) Strand=Plus/Minus Query 35304 ATACGGCTTT-CACAATGGCAAATCCGATTATTCCGTGGATCGGCGGCAAGCGGCGCCTT 35362 |||||| || || ||||||| ||| || ||||| ||| | ||||||||||| ||| | Sbjct 418 ATACGGAATTACAAAATGGCATCTCCCATCATTCCCTGGCTGGGCGGCAAGCGTCGCTTG 359 Query 35363 GCAGACCATCTCATTCCGCGCTTTCCGGCGCACGACTGCTACGTTGAAGTGTTCGCGGGC 35422 || || | || | ||| ||||||| | ||| | |||||||| ||| |||||| ||| Sbjct 358 GCTGATCGCCTTCTGCCGTACTTTCCGCCTCACCAGTGCTACGTCGAACCGTTCGCAGGC 299 Query 35423 GGCGCTGCGTTGTATTTCATGCGGCC---GCCGGCAAAGGTCGAGGTGATCAACGACGTT 35479 ||||| || ||| || ||||||| |||||| | |||||||| |||||||||| Sbjct 298 GGCGCAGCCATGTTCTTTCTGCGGCCTATGCCGGCCGACGTCGAGGTTCTCAACGACGTC 239 Query 35480 AACGGCGAACTGATCAACCTGTATCGCGTCGTTCAGCATCACCTCGAGGAATTCGTGCGG 35539 ||||| |||||||||||||| ||||| || || |||||||||| ||||||||||| || Sbjct 238 AACGGAGAACTGATCAACCTCTATCGGGTGGTGAAGCATCACCTGGAGGAATTCGTACGC 179 Query 35540 CAGTTCAAATGGGCGCTCACCAGTCGGCAGGTGTTCGAGTGGCTGAAGCAGACGGCGCCG 35599 ||||||||||||||||| | || || ||||||||| | ||||| || || | | Sbjct 178 CAGTTCAAATGGGCGCTGTCGAGCCGACAGGTGTTCAAATGGCTCCAGATCACACCTGAG 119 Query 35600 GAAACGCTCACCGACATCCAGCGTGCGGCGCGGTTCTACTATCTGCAGAAAAACTGCTTT 35659 || || || |||||||||||||| || || |||||| |||||| ||| | | ||||| Sbjct 118 GAGACCCTGACCGACATCCAGCGGGCCGCCAGGTTCTTCTATCTACAG-CACTCGGCTTT 60 Query 35660 -GGCGGGATTGTCCACGGGCAGACGTTCGGCACGGCTACCACTGCGCCGCCGGGTCT 35715 || || |||| | || ||| | | ||||| || || || || || || ||||| Sbjct 59 CGGTGGCCGTGTCGATGGTCAGTCTTATGGCACAGCGACGACGGCCCCCCCAGGTCT 3 >seq194231 Length=202 Score = 167 bits (184), Expect = 6e-37 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 35520 ACCTCGAGGAATTCGTGCGGCAGTTCAAATGGGCGCTCACCAGTCGGCAGGTGTTCGAGT 35579 |||| ||||||||||| || |||||||| |||||||| ||||| |||||| ||||| ||| Sbjct 1 ACCTGGAGGAATTCGTCCGCCAGTTCAAGTGGGCGCTGACCAGCCGGCAGATGTTCAAGT 60 Query 35580 GGCTGAAGCAGACGGCGCCGGAAACGCTCACCGACATCCAGCGTGCGGCGCGGTTCTACT 35639 ||| ||| | ||| ||| || ||||| || || || ||||| ||||| || ||||||| Sbjct 61 GGCAGAAAGAAACGCGGCCCGAGACGCTGACTGATATTCAGCGGGCGGCCCGCTTCTACT 120 Query 35640 ATCTGCAGAAAAACTGCTTTGGCGGGATTGTCCACGGGCAGACGTTCGGCACGGCTACCA 35699 | ||| | | |||||||| |||| | | | || |||||||||||||| || || | Sbjct 121 ACCTGATGCAGAACTGCTTCAGCGGCAAGCTGGAGGGTCAGACGTTCGGCACCGCAACGA 180 Query 35700 CTGCGCCGCCGGGTCTGAAC 35719 | ||||||||||| |||||| Sbjct 181 CGGCGCCGCCGGGGCTGAAC 200 >seq200661 Length=255 Score = 149 bits (164), Expect = 2e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 35313 TCACAA-TGGCAAATCCGATTATTCCGTGGATCGGCGGCAAGCGGCGCCTTGCAGACCAT 35371 |||||| ||||||| ||||| ||||| ||| | || |||||||| ||||| || ||| | Sbjct 24 TCACAAGTGGCAAAACCGATCATTCCCTGGCTGGGTGGCAAGCGCCGCCTGGCCGACAAG 83 Query 35372 CTCATTCCGCGCTTTCCGGCGCACGACTGCTACGTTGAAGTGTTCGCGGGCGGCGCTGCG 35431 | |||| | ||||| ||| ||||||||| || ||||||||||| || || Sbjct 84 ATTCTTCCCCTTTTTCCCAAGCATTCCTGCTACGTCGAGCCATTCGCGGGCGGGGCGGCA 143 Query 35432 TTGTATTTCATGCGGCCG---CCGGCAAAGGTCGAGGTGATCAACGACGTTAACGGCGAA 35488 ||| |||| || || ||||| ||||| |||||| | |||||| | |||||||| Sbjct 144 TTGCTTTTCGCCAGGTCGGAGCCGGCCAAGGTGGAGGTGCTGAACGACATCAACGGCGAC 203 Query 35489 CTGATCAACCTGTATCGCGTCGTTCAGCATCACCTCGAGGAATTCGTGCG 35538 ||| |||||||||| || || || || || ||||| ||||||||||| || Sbjct 204 CTGGTCAACCTGTACCGGGTAGTGCAACACCACCTGGAGGAATTCGTCCG 253 >seq201839 Length=207 Score = 125 bits (138), Expect = 2e-24 Identities = 145/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 35311 TTTCACAATGGCAAATCCGATTATTCCGTGGATCGGCGGCAAGCGGCGCCTTGCAGACCA 35370 || || ||||||| ||| || ||||||||| ||||||||||||| ||||| || |||| Sbjct 11 TTACAAAATGGCATCTCCCATCATTCCGTGGCTCGGCGGCAAGCGCCGCCTGGCCGACCG 70 Query 35371 TCTCATTCCGCGCTTTCCGGCGCACGACTGCTACGTTGAAGTGTTCGCGGGCGGCGCTGC 35430 ||| ||||| || || | ||| | ||||| || || |||||| ||||| || || Sbjct 71 TCTGCTTCCGTATTTCCCACCCCACCAGTGCTATGTCGAGCCGTTCGCCGGCGGGGCGGC 130 Query 35431 GTTGTATTTCATGCGGCC---GCCGGCAAAGGTCGAGGTGATCAACGACGTTAACGGCGA 35487 ||| ||| ||||||| | |||| | || || || |||||||||| || ||||| Sbjct 131 CATGTTCTTCCTGCGGCCCATGGCGGCCGACGTTGAAGTACTCAACGACGTCAATGGCGA 190 Query 35488 ACTGATCAACCTGTA 35502 ||||| |||||||| Sbjct 191 GCTGATAAACCTGTA 205 >seq55791 Length=415 Score = 118 bits (130), Expect = 3e-22 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 35686 CGGCACGGCTACCACTGCGCCGCCGGGTCTGAACTTGCTGCGGATCGAGGAAGAATTATC 35745 |||||| || || || ||||||||||| |||||| |||| ||| | || ||| || || Sbjct 415 CGGCACCGCAACGACGGCGCCGCCGGGGCTGAACCTGCTCCGGCTGGAAGAAACGTTGTC 356 Query 35746 CGCGGCGCACTTGCGCCTCGCGAGCGCATATA--TCGAGCGTCTGGACTGGGCGGATTGC 35803 ||| || ||| | ||||| ||| || || || | |||| |||| |||| ||||||| Sbjct 355 CGCAGCCCACCTTCGCCTGGCG--CGTATCTACGTGGAGCATCTGCCCTGGCTGGATTGC 298 Query 35804 ATCGATCGCTATGACCGGCCGCACACGTTGTTCTATCTCGATCCGCCGTATTTCGAGACG 35863 | | ||||| ||| ||||||||||| | ||||| | || ||||| || | || ||| Sbjct 297 GTGAAGCGCTACGACAGGCCGCACACGCTCTTCTACATGGACCCGCCCTACTGGGACACG 238 Query 35864 CGCGGCTACGGTGTCGATTTC 35884 ||||||||| || || ||| Sbjct 237 GCCGGCTACGGAGTGGAATTC 217 >seq149116 Length=413 Score = 111 bits (122), Expect = 4e-20 Identities = 276/416 (66%), Gaps = 6/416 (1%) Strand=Plus/Plus Query 29920 AAGTGGGGGCTGTACGAAATTGCGCGGTATTGCGACGTCATGGTGTCGGACGGCAGAGGC 29979 |||||||| |||||| | || | || |||||||||| ||||| |||||| ||| Sbjct 1 AAGTGGGGCCTGTACCAGATCGGCCGCTATTGCGACGAGATGGTCGATGACGGCTTCGGC 60 Query 29980 GGCGTTGAACCGCGCTTCACGTGCAACTGCGTGATCCAGTCGGCCGCCGACGCGTACAAG 30039 || |||||||||||||| |||||| | | || ||| |||||||| ||| | Sbjct 61 GGAAAGGAACCGCGCTTCACCTGCAACGTCTACCTGCAACAGGCGGCCGACGCCTACCGG 120 Query 30040 GTGCTGCAAGATATTGCCAGCGTGTTCCGCGGCATTTCGTACTGGGGGCCGGGTGCGGTA 30099 ||| |||| || | ||| | | ||||||||||| | || |||| | || || Sbjct 121 GTGGTGCAGGACTTCGCCTCCATTTTCCGCGGCATGGCTTATTGGGCCAACGCCGCCGTG 180 Query 30100 GTCGCTTCCGCGGACATGCCTTCCGATCCGGTCTACGTTTACACCGCGGCGAACGTGATC 30159 |||| || || |||||||| ||||||||||||| | | | |||| |||||| || Sbjct 181 TTCGCCTCGGCCGACATGCCGGGCGATCCGGTCTACACGTTCTCGTCGGCCAACGTGGTC 240 Query 30160 GACGGGGCATTTCGCTACGTAGGGAGCGAGCGCAAGACGCGATACACGGTCGCGCTTGTC 30219 || || || |||||| || | || | ||||| ||||| || ||||| || Sbjct 241 GATGGCCGCTTCAACTACGTCGGCTCGGCGCTGACCACGCGCTACACCGTGGCGCTGGTG 300 Query 30220 AGCTACAACGATCCAT---CGAACCAGTACAAACAGGCGGTCGAGTACGTGCCGGACGAC 30276 || ||||| ||| |||| | | ||| |||||||||||| | || | Sbjct 301 TCCTGGAACGA--CATGTCCGAAATGGGTCGC-CAGAAGGTCGAGTACGTCGAGAACCGC 357 Query 30277 GACGGTATTGCGCGTTACGGCGTCATCAAGACGCAGGTAACGGCGTTCGGTTGCAC 30332 || || || ||||| || || || || | | || || | |||||| ||||| Sbjct 358 GAAGGCATCGCGCGCTATGGAATCCAGCAGGTGGAAGTGACCGGGTTCGGCTGCAC 413 >seq145634 Length=321 Score = 93.3 bits (102), Expect = 1e-14 Identities = 128/175 (73%), Gaps = 12/175 (7%) Strand=Plus/Plus Query 28773 TGGGCGTGTCGATGGCGCTCGGCGGCATCACGCAGATGCTCAGTCCGCAGCA---GGCC- 28828 ||||| || ||||| |||| |||||| | |||| |||||| || ||||| |||| Sbjct 115 TGGGCCTGGCGATGACGCTGGGCGGCGTGGTGCAGTTGCTCACGCCACAGCAACGGGCCC 174 Query 28829 -GGGCT----GGCCGGTGCTGCCGACAACGGAACCTCGTACTACTTCAACGGCGCGGTGA 28883 | || || ||| || |||||||||| | |||||| ||||||||||| |||| | Sbjct 175 TGAGCGTCAAGGACGG-GC--CCGACAACGGCGCGTCGTACAACTTCAACGGCCCGGTCA 231 Query 28884 ACAGCGCCGCTCAGGGCGAACCGGTGCCGCTCGTGTACGGAGAGATGGTCGTCGG 28938 ||| | | || |||||| | || |||||| | |||| || |||||| |||| || Sbjct 232 ACACCACGGCGCAGGGCAACCCCGTGCCGGTGCTGTATGGCGAGATGTTCGTGGG 286 >seq63993 Length=1130 Score = 82.4 bits (90), Expect = 2e-11 Identities = 227/344 (66%), Gaps = 8/344 (2%) Strand=Plus/Plus Query 35769 GCGCATATATCGAGCGTCTGGACTGGGCGGATTGCATCGATCGCTATGACCGGCCGCACA 35828 || |||| |||||| || || ||||||| ||||| || ||||| ||||||||||||| Sbjct 7 GCACATACGTCGAGCAGCTCGATTGGGCGGCGTGCATTGACCGCTACGACCGGCCGCACA 66 Query 35829 CGTTGTTCTATCTCGATCCGCCGTATTTCGAGACGCGCGGCTACGGTGTCGATTTCCCGT 35888 | | ||||| |||||||| || | ||||| || ||||| || || || | Sbjct 67 CACTCTTCTACGCTGATCCGCCCTACTGGGAGACTGAGGGGTACGGCGTGCCGTTTCCTT 126 Query 35889 TCGCTGAGTACGAGCGGATCGCGGAGAGGCTCCGCCGCATCAAAGGGCGAGCCATAGTAA 35948 | ||||||||| ||| |||| | |||| ||||| || ||| | || | Sbjct 127 GGGAACAGTACGAGCTGATGGCGGCCAAGCTCAAAACGATCAAGGGCAAAGCAGTGGTCA 186 Query 35949 GCCTGAACGACCACGAGCAGATCCGTCGCGTATTCGACGGATTTC-ACATCGAGACGGTG 36007 || | || || ||| |||||| | || | | ||| ||| |||| ||| | | Sbjct 187 GCATCAATGATCACCCTGCGATCCG-AGAGTGCTTCAGGGACTTCGACATGGAGGCTCTC 245 Query 36008 CCGCTGCAGTACACGGTG---GCCGGCTCGCATCGAAGCGTCGAGCGGAGCGAACTGATC 36064 |||| | ||||| ||| | ||| | ||| | |||||||| |||| ||| || Sbjct 246 AAGCTGGACTACACCGTGGGTGGGGGCGCCAATC---GTGTCGAGCGCGGCGAGCTGGTC 302 Query 36065 ATCTTCAGTTGGGATGACGCGGCGCAGCCGGCCGGCTTGTTCTA 36108 |||| ||||||| | | ||| |||| || ||| |||| || Sbjct 303 ATCTACAGTTGGAACAGGGAGGCAGAGCCAGCAGGCCTGTTTTA 346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127195293299256