Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3835 113 2e-19 seq210791 105 3e-17 seq8060 87.8 7e-12 >seq3835 Length=59006440 Score = 113 bits (124), Expect = 2e-19 Identities = 398/607 (66%), Gaps = 26/607 (4%) Strand=Plus/Minus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGT----C 451953 || ||||||||||| || || || || || |||||||| || ||| | || || | Sbjct 52106745 GAGATTGTGCTTGTGGGGGGCTCCACTCGTATTCCTAAGATCCAAAAGTTGCTGCAGGAC 52106686 Query 451954 TTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013 ||||| | || ||| | || |||||| | ||||| |||||||||||||| || Sbjct 52106685 TTCTTCAAT----GGTAAAGAGCTCAACAAGAGCATCAATCCAGATGAAGCTGTTGCTTA 52106630 Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGA 452070 ||||||||| || ||||||||||| || | || ||| | |||||| | ||| Sbjct 52106629 TGGTGCTGCTGTGCAAGCAGCTATCCTCATGGG---AGACAAGTCTGAAAATGTGCAAGA 52106573 Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130 | | || | | ||||| || || || || || || | || |||||||||||| |||| Sbjct 52106572 TCTGCTCCTGTTGGATGTCACCCCCCTGTCCCTGGGCATCGAGACAGCTGGTGGAGTGAT 52106513 Query 452131 GACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTAC 452190 |||| | | || || || || | ||||| ||| | | || || || | | Sbjct 52106512 GACTGCTCTCATCAAGCGTAACACCACCATTCCCACCAAACAAACGCAGACCTTCA--CC 52106455 Query 452191 AGCAAGT--GATAACCA-ACCAGGTGTAACTA-TTCAAGTGTTTGAAGGAGAACGTGCAA 452246 | | | | || ||||| | || | || ||| | || |||| |||||| || | || | Sbjct 52106454 ACCTACTCAGACAACCAGAGCA-GCGT-CCTAGTCCAGGTGTATGAAGGTGAGAGGGCTA 52106397 Query 452247 TGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAA 452306 ||||| || || ||| || || | ||| || || ||| || ||| || Sbjct 52106396 TGACAAAGGACAACAATTTGCTGGGCAAGTTTGACCTAACAGGCATCCCCCCTGCACCCC 52106337 Query 452307 GGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGA 452366 | ||| ||||| ||||| | || | || | ||||| |||||||| || || || | Sbjct 52106336 GTGGAGTCCCTCAGATTGAGGTCACTTTCGACATAGATGCTAATGGTATCCTGAACGTCA 52106277 Query 452367 GTGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAAC 452425 |||| || || || | || ||| |||| || || || || || ||||| || Sbjct 52106276 GTGCTGTGGACAAGAGTACAGGGAAA-GAGAACAAGATAACCATCACCAATGACAAGGGT 52106218 Query 452426 CG-TTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGA 452484 || ||| | ||||| || ||||| ||||| | || ||||| |||| ||| | || Sbjct 52106217 CGCCTTAGC-AAAGATGACATTGACCGTATGGTGCAAGAGGCAGAGAAATACAAAGCGGA 52106159 Query 452485 TGATGAA 452491 |||||| Sbjct 52106158 GGATGAA 52106152 >seq210791 Length=250 Score = 105 bits (116), Expect = 3e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||| || || || || || || |||||||||||||| || || |||||||| Sbjct 133 GTTACGGATGCGGTTATCACGGTACCAGCCTATTTCAATGATGCTCAGCGCCAAGCAACC 74 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 ||||| || || | ||||| || || ||||| || || || |||||||| ||||| || Sbjct 73 AAAGACGCTGGCCGCATTGCGGGGTTGAATGTGCTGCGCATCATTAATGAGCCTACGGCT 14 Query 451433 GCTGCT 451438 |||||| Sbjct 13 GCTGCT 8 >seq8060 Length=10292962 Score = 87.8 bits (96), Expect = 7e-12 Identities = 95/122 (78%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 451306 TTCTCCAG-TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGC 451364 |||| ||| ||||| |||| || ||||||| || || || ||||||||||| || || | Sbjct 9431298 TTCTGCAGGTTACTCATGCTGTTGTTACTGTGCCAGCCTACTTCAATGATGCTCAGCGTC 9431239 Query 451365 AAGCAACTAAAGATGCAGG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 | || || |||||||| || ||| |||||||| || || || | || ||||||||||| Sbjct 9431238 AGGCCACAAAAGATGCTGGTACA-ATTGCTGGATTGAACGTGATGCGCATTATTAATGAG 9431180 Query 451424 CC 451425 || Sbjct 9431179 CC 9431178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1969863651174888