Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3835 156 3e-32 seq3581 111 1e-18 >seq3835 Length=59006440 Score = 156 bits (172), Expect = 3e-32 Identities = 929/1471 (63%), Gaps = 30/1471 (2%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | || || || |||||||| ||||| | || || ||||| ||||| |||||||| Sbjct 52106273 GCACTGACGTTCAGGATACCATTAGCATCTATGTCGAAAGTGACCTCAATCTGAGGGACT 52106332 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | | ||||| ||||| ||| | | ||| | ||||| ||| || || || Sbjct 52106333 CCACGGGGTGCAGGGGGGATGCCTGTTAGGTCAAACTTGCCCAGCAAATTGTTGTCCTTT 52106392 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGA-TAGTAA-CTACAGTTTGATTATCTGAAT 517436 || | | ||||| || | | |||| ||| | || | | || || ||||| | Sbjct 52106393 GTCATAGCCCTCTCACCTTCATACACCTGGACTAGGACGCTGC--TCTGGTTGTCTGAGT 52106450 Query 517437 AAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 517495 | || || || |||| ||| ||| ||||| || ||||| | | || | | Sbjct 52106451 AGGTGGTGAAGG-TCTGCGTTTGTTTGGTGGGAATGGTGGTGTTACGCTTGATGAGAGCA 52106509 Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | ||||| ||||| || | || || || || || |||||||| | |||| Sbjct 52106510 GTCATCACTCCACCAGCTGTCTCGATGCCCAGGGACAGGGGGGTGACATCCAACAGGAGC 52106569 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || ||| | |||||| | | || | || ||||||||||| | |||||||||| Sbjct 52106570 AGATCTTGCACATTTTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCACCA 52106629 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-T 517674 || |||||||||||||| ||||| | | | || || | |||||||||||| || | Sbjct 52106630 TAAGCAACAGCTTCATCTGGATTGATGCTCTTGTTGAGCTCTTTACCATTGAAGAAGTCC 52106689 Query 517675 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 || | || || | | |||||||||||||| || || || || | ||||| || || Sbjct 52106690 TGCAGCAACTT-TTGGATCTTAGGAATACGAGTGGAGCCCCCCACAAGCACAATCTCCTG 52106748 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC--AAGACCC 517792 | ||| |||||| || || | ||| | | || || || || || | | || Sbjct 52106749 GATCTGGCCTTTATCAAGCTTGGCATCACGCAGGGCCTTCTCCACTGGCTCCAAGGTACC 52106808 Query 517793 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATA 517851 || ||| | || | | || || ||||| || | ||| || || | || | Sbjct 52106809 GCGGAAAAGA--TCAGCATTGAGCTCCTCGAAGCGGGCACGAGT--GATGGAGGTGTAGA 52106864 Query 517852 A-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 | ||||| || ||||| | || |||| ||||| | | ||| || ||||| || | Sbjct 52106865 AGTCAATGCCCTCGAAGAGGGAGTCAATCTCAATGCTGGCTTGCGTGGAAGAGCTCAGAG 52106924 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATT 517968 ||| || || | ||||| ||||| | || | | | || | | | |||| | Sbjct 52106925 TACGCTTCGCCCTCTCACAAGCTGTACGCAGCCGCCTCACTGC--TCGTTTATTGCCAGC 52106982 Query 517969 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTA 518026 | || || | || | |||||| ||||| ||| | ||| | || | ||| || Sbjct 52106983 GATGTCACGCTTGTGCTTGCGCTTGAACTCTTCTACAAA--ATGGTTCACCATACGGTTG 52107040 Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 |||||||| || || |||| | || | || | || | | || | || | ||| Sbjct 52107041 TCAAAATCCTCCCCACCCAGGTGGGTGTCCCCAGCTGTGGACTTCACCTCAAAGATGCCA 52107100 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 || |||| | | | | |||||| || || || ||| ||||| || |||||| Sbjct 52107101 TCCTCAATGGTAAGGATGGACACATCAAAAGTGCC-CCCTCCAAGTCAAAGATGAGTACA 52107159 Query 518147 TTCATTTCTTTGTCTTGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 ||| | ||| | || || || || | || || |||| |||||| || || | Sbjct 52107160 TTCTTCTCTCCAGCCCGGGTACCTTCTTGTCCAAGCCGTAGGCAATAGCAGCTGCTGTGG 52107219 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | || || ||||| | || || || || |||| || | || |||||||| ||||| | Sbjct 52107220 GCTCGTTGATAATACGCATCACGTTGAGGCCAGTGATAGTGCCAGCATCTTTGGTGGCCT 52107279 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321 | | || || || || || || || || || || ||||| |||| ||| | ||| | Sbjct 52107280 GGCGCTGGGAGTCATTGAAGTAAGCGGGCACTGTGATAACAGCATTCTGTACCTTTTTCC 52107339 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 | | |||||| || | | ||||| || | | | ||| || || | |||| Sbjct 52107340 CCAGATAAGCCTCAGCAATCTCCTTCATCTTGGTCAGCACCATGGAGCTGATCTCCTCTG 52107399 Query 518382 GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 518441 || | | ||| || | || |||| | | || || | | | Sbjct 52107400 GGAAGAAGGTCTTCATCTCGCCCTTGTACTCCACTTGCACCTTGGGCTTGCCGCTCTCGT 52107459 Query 518442 TAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTC 518501 | | || || ||||||| ||||| || || || || | |||||| | | | | Sbjct 52107460 TCACCACACGGAAGGGCCAGTGCTTCATGTCCGACTGCACTGTGGGGTCATCATACTTGC 52107519 Query 518502 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATT 518561 || || | ||||| |||||||| || || ||||| || || || || |||| | | Sbjct 52107520 GGCCGATAAGACGTTTGGCATCAAAGATGGTGTTGGTGGGGTTCATCGCCACTTGGTTCT 52107579 Query 518562 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 518621 |||| ||||| || || || | ||||| || || || | ||||| || || |||| Sbjct 52107580 TGGCAGCATCCCCGATAAGGCGCTCTGTATCGGTGAAGGCCACATAGCTGGGCGTGGTGC 52107639 Query 518622 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 518681 | || || || || || || || || || ||||| |||| || | ||||| || ||| Sbjct 52107640 GGTTCCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGAAAGACACCCACGCAAG 52107699 Query 518682 TAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | | || || || | ||| || || || || Sbjct 52107700 AATACGTGGTGCCCAGATCGATGCCGATGGC 52107730 >seq3581 Length=70658698 Score = 111 bits (122), Expect = 1e-18 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| || || ||| | |||||||| |||||||| |||||| | ||| | | | ||||| Sbjct 14302967 TGTTGTGGCTACAGTGGCATTTGGAATGGGTATCAATAAAGCAGATATCCGGATGGTTAT 14303026 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 ||||||||| || || ||| | || ||| ||||||||||||||||| ||||| ||||| Sbjct 14303027 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGAAGAGCTGGTCG 14303086 Query 367113 TGATGG 367118 |||||| Sbjct 14303087 TGATGG 14303092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3769345226823916