Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3835 300 2e-76 seq9159 183 4e-41 seq30879 165 1e-35 >seq3835 Length=59006440 Score = 300 bits (332), Expect = 2e-76 Identities = 1037/1598 (65%), Gaps = 36/1598 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| || || || || ||||| ||||| |||||||| ||||| | Sbjct 52106152 TTCATCCTCCGCTTTGTATTTCTCTGCCTCTTGCACCATACGGTCAATGTCATCTTT-GC 52106210 Query 6628 TAAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| | ||||| ||||| || || || ||||| | ||| || | ||| || Sbjct 52106211 TAAGGCGACCCTTGTCATTGGTGATGGTTATCTTGTTCTCTTTCCCTGTACTCTTGTCCA 52106270 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 ||||||| || |||| |||||||| ||||| | ||||| | || | ||| || || Sbjct 52106271 CAGCACTGACGTTCAGGATACCATTAGCATCTATGTCGAAAGTGACCTCAATCTGAGGGA 52106330 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 || | ||||| | || || || |||| ||||| | || || ||| |||| ||| Sbjct 52106331 CTCCACGGGGTGCAGGGGGGATGCCTGTTAGGTCAAACTTGCCCAGCAAATTGTTGTCCT 52106390 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGT-TGATTATCTTGT 6865 | | | | | ||||||||||| || | | | || || | | || || ||| Sbjct 52106391 TTGTCATAGCCCTCTCACCTTCATACACCTGGACTAGGAC-GCTGCTCTGGTTGTCTGAG 52106449 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || | |||| | || || || | ||||| || || || | | || | | Sbjct 52106450 TAGGTGGTGAAGGTCTGCGTTTGTTTGGTGGGAATGGTGGTGTTACGCTTGATGAGAGCA 52106509 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | ||||| || |||| || || ||||| || || || ||||| || | | Sbjct 52106510 GTCATCACTCCACCAGCTGTCTCGATGCCCAGGGACAGGGGGGTGACATCCAACAGGAGC 52106569 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || ||||| ||| ||| | || ||| | | ||| || ||||| || | || || Sbjct 52106570 AGATCTTGCACATTTTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCACCA 52106629 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || || ||||| || || || | || || || |||||||| || || | ||| Sbjct 52106630 TAAGCAACAGCTTCATCTGGATTGATGCTCTTGTTGAGCTCTTTACCATTGAAGAAGTCC 52106689 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || | ||| || || || || || || || || || || | || || || | Sbjct 52106690 TGCAGCAACTTTTGGATCTTAGGAATACGAGTGGAGCCCCCCACAAGCACAATCTCCTGG 52106749 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 | | |||||| | ||| | || || || | || || || || |||| | || Sbjct 52106750 ATCTGGCCTTTATCAAGCTTGGCATCACGCAGGGCCTTCTCCACTGGCTCCA---AGGTA 52106806 Query 7226 C---GGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAA 7282 | |||| | || | || ||||| || || ||||| || ||||| || ||||| Sbjct 52106807 CCGCGGAAAAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGTGATGGAGGTGTAGAAG 52106866 Query 7283 TCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC--- 7339 |||| ||| ||| | | || ||||| |||||| | | ||| ||| ||||| | Sbjct 52106867 TCAATGCCCTCGAAGAGGGAGTCAATCTCAATGCTGGCTTG---CGTGGAAGAGCTCAGA 52106923 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || | |||||| || || || | || | | || || || || | Sbjct 52106924 GTACGCTTCGCCCTCTCACAAGCTGTACGCAGCCGCCTCACTGCTCGTTTATTGCCAGCG 52106983 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||| || || || || |||||||| || || | | | || Sbjct 52106984 ATGTCACGCTTGTGCTTGCGCTTGAACTCTTCTACAAAATGGTTCACCATACGGTTGTCA 52107043 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 ||||| || ||||||| ||| || ||||| || || | || || |||||||| || | Sbjct 52107044 AAATCCTCCCCACCCAGGTGGGTGTCCCCAGCTGTGGACTTCACCTCAAAGATGCCATCC 52107103 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 |||||| | | | || |||||||| || || || || || ||||| |||||||| ||| Sbjct 52107104 TCAATGGTAAGGATGGACACATCAAAAGTGCCCCCTCCAAG-TCAAAGATGAGTACATTC 52107162 Query 7580 GTATCGTCGTCTTTG-----TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | | | ||||| || | ||||| || ||||| || || || || | Sbjct 52107163 TTCTCTCCAGCCCGGGTACCTTCTTGTCCAAGCCGTAGGCAATAGCAGCTGCTGTGGGCT 52107222 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || |||||||| | ||| ||||||| ||||| | |||||||| || || || | Sbjct 52107223 CGTTGATAATACGCATCACGTTGAGGCCAGTGATAGTGCCAGCATCTTTGGTGGCCTGGC 52107282 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || || || || ||||| || || || || | || || | | || || || || | Sbjct 52107283 GCTGGGAGTCATTGAAGTAAGCGGGCACTGTGATAACAGCATTCTGTACCTTTTTCCCCA 52107342 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 |||| | || || || || ||||| ||||| || ||||| || ||||| || | | Sbjct 52107343 GATAAGCCTCAGCAATCTCCTTCATCTTGGTCAGCACCATGGAGCTGATCTCCTCTGG-G 52107401 Query 7815 CAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC-C 7872 | | || ||| | || || || | || |||| | | |||| || || || | | Sbjct 52107402 AAGAAGGTCTTCATCTCGCCCTTGTACTCCACTTGCACCTTGGGCTT----GCCGCTCTC 52107457 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG-TCCGAAAACT 7931 | | || | | ||| | ||||| || || || ||| || || | ||| Sbjct 52107458 GTTCACCACACGGAAGGGCCAGTGCTTCATGTCCGACTGCAC-TGTGGGGTCATCATACT 52107516 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | | ||||||||||| || |||||||| | ||||| |||||||||| || ||||| Sbjct 52107517 TGCGGCCGATAAGACGTTTGGCATCAAAGATGGTGTTGGTGGGGTTCATCGCCACTTGGT 52107576 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG- 8050 |||| || || ||||||||||| || || || || || || || || || | |||| Sbjct 52107577 TCTTGGCAGCATCCCCGATAAGGCGCTCTGTA---TCGGTGAAGGCCACATA-GCTGGGC 52107632 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 || || || ||||| |||||||| || || || || || | | | || |||| || Sbjct 52107633 GTGGTGCGGTTCCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGAAAGACACCC 52107692 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||| |||||||| || || | ||| || ||||| || Sbjct 52107693 ACGCAAGAATACGTGGTGCCCAGATCGATGCCGATGGC 52107730 >seq9159 Length=6432859 Score = 183 bits (202), Expect = 4e-41 Identities = 368/543 (68%), Gaps = 6/543 (1%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || |||| ||||| || || || Sbjct 3140037 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAACTCTTTGCCATTGAAG 3139978 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | || | || || ||||| || ||||| || || || || || |||| ||||| Sbjct 3139977 AAGTCTTGCAGCAGTTTCTGAATCTTTGGGATGCGGGTAGAGCCCCCAACCAGCACGATG 3139918 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | ||| || || | ||| | || || || | || || ||||| |||| Sbjct 3139917 TCATGGATCTGCGACTTGTCCAGCTTGGCATCCCGCAGGGCCTTCTCTACAGGATCCAGG 3139858 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| | ||| ||||| ||||| || | ||| |||||||| ||| Sbjct 3139857 GTGCCACGGAACAGGTCAGCATTCAGCTCCTCGAAACGAGCTCTGGTGATGGATGTGTAG 3139798 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | ||||| |||||||| | | ||||| | || || | Sbjct 3139797 AAGTCAATACCCTCATAGAGAGAATCGATTTCAATACTGGCTTGTGTGCTTGATGACAGG 3139738 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || || ||||| || |||||||| || || | ||||||| || | ||| | Sbjct 3139737 GTACGTTTTGCACGTTCACACGCAGTACGAAGGCGACGAACTGCTCTTTTGTTCTCACTG 3139678 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAA 7456 || |||||||| || || || || || || || |||||| | || | | | | Sbjct 3139677 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTTG--- 3139621 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || |||||||| |||||||| || || || || || || | ||| || |||||||| || Sbjct 3139620 TCAAAATCTTCTCCACCCAAATGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 3139561 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || |||||||| || ||||| || ||||||||||| || ||| Sbjct 3139560 TCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAAATAAGAACG 3139501 Query 7577 TTC 7579 ||| Sbjct 3139500 TTC 3139498 >seq30879 Length=12587 Score = 165 bits (182), Expect = 1e-35 Identities = 311/452 (69%), Gaps = 4/452 (1%) Strand=Plus/Minus Query 22398 AATTCTAGAAGCGATCCGTTTAGCAGGTCTAACAAAAACGTGTAAATTTTATCAGGCATC 22457 |||||| ||||| || ||| | || ||| | | | | || ||||||||||||||||| Sbjct 11353 AATTCTGGAAGCAATTCGTATTGCGGGTTTGAAAGATACAACAAAATTTTATCAGGCATC 11294 Query 22458 TACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAAAATACACCGTTTTA 22517 ||||| ||||||||||| || | |||| || ||||| |||| || || || || Sbjct 11293 GACATCCGAGCTCTACGGCCTGGTTCAAGAAATACCTCAAAAAGAAACAACGCCTTTCTA 11234 Query 22518 CCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCGACAGTTAATTATAG 22577 |||||||||||| |||| || ||||| || | || ||| || || || || || Sbjct 11233 CCCGCGTTCACCCTATGCCGTGGCTAAGATGTATGCTTACTGGATCACGGTCAACTACAG 11174 Query 22578 AGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCACGAATCACCGAGACG 22637 ||| | || || |||| || ||||| || || | ||||| || || || |||| || Sbjct 11173 GGAAGCCTATGGCATGTACGCGTGCAACGGAATTCTTTTCAATCATGAGTCTCCGATTCG 11114 Query 22638 GGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAATATCAGTGCAGGTAA 22697 ||||||| |||||||| ||||| || || | | | | || ||||| || Sbjct 11113 CGGTGAAACATTCGTGACTCGAAAGATTACGCGTGCTCTGGCGCGTATCAAGCTTGGACT 11054 Query 22698 ACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGGGGTCATGCACGCGA 22757 ||| |||| | || ||||| || | ||||| || || |||||||| || || || Sbjct 11053 GCAAGAATGCCTTTATCTTGGAAATATGAATGCGCTTCGCGACTGGGGTCACGCGCGTGA 10994 Query 22758 TTACG-TGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGAAGATTTTGTTATTG 22816 || | ||| ||| | |||| || |||| || || || ||||||| ||||| |||| Sbjct 10993 CTATGTTGAGATGCA-GTGGCTGATGCTACAGCAGGACAAGGCGGAAGACTTTGTGATTG 10935 Query 22817 CAACAGGCGTAACAACA-ACCGTGAGAGAATT 22847 | || || | |||| || | || ||||||| Sbjct 10934 CTACGGGTG-AACAGCACTCGGTCCGAGAATT 10904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633296583440240