Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq201653 96.9 8e-16 seq140712 96.9 8e-16 >seq201653 Length=261 Score = 96.9 bits (106), Expect = 8e-16 Identities = 179/262 (68%), Gaps = 3/262 (1%) Strand=Plus/Plus Query 32376 CGAGGCGTTGCTCGACGCGCTGAACACAGGCCGCAATCAAATCTTCCTGTCGGCCAGCAA 32435 ||| || || ||||||| ||| |||| || || ||||| || || | || ||| ||| Sbjct 1 CGAAGCCCTGATCGACGCCCTGGACACGGGGCGTAATCAGATGTTTGTTTCCGCCTCCAA 60 Query 32436 GGCACAGGCGCACGTGTTCCGCCAGTACATCGTGCAGTTCGCGAAAGACGCGGTCGACGT 32495 ||| ||||||||| |||| | |||||| || ||| |||| ||| || || Sbjct 61 GGCGCAGGCGCACCAGTTCAAAAACTACATCACCGCCTTTGCGCAAGA---GGTTGATGT 117 Query 32496 CGAGCTGAAGGGCGACCCGATCGTGCTGCCGAACGGTGCGACGCTGTACTTCCTCGGCAC 32555 |||||| || || | ||| | ||||| |||| || || | || |||||||| Sbjct 118 GGAGCTGCGCGGGGAAACCATCATCCTGCCAAACGCGGCTGAATTGCATTTTCTCGGCAC 177 Query 32556 CAACGCGCGCACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAGTACTTCTGGGT 32615 |||| | ||| || ||| || | ||||| |||||| | ||||| || |||||| | Sbjct 178 CAACTCCAACACCGCACAGGGCCGGCCAGGCAATCTGTATCTGGACGAATATTTCTGGAT 237 Query 32616 GCCGCGCTTCCAGGAGCTGCGC 32637 || ||||| || | |||||| Sbjct 238 CCCCGGCTTCAAGAAACTGCGC 259 >seq140712 Length=381 Score = 96.9 bits (106), Expect = 8e-16 Identities = 195/284 (69%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 33726 TTCGGCGACCCGATCGCCGTGCTGGATCGGCGCGAGCTGCTCGACTACGTCGAGTGCATG 33785 ||||||||||||||| | |||||||||||||||| | || || || | |||||| || Sbjct 304 TTCGGCGACCCGATCCCGATGCTGGATCGGCGCGAAATACTGGATTATCTGGAGTGC-TG 246 Query 33786 CG-CATGGGGAACTGGTACGAGCCGCCGCTGCCGCTCGACGGGCTCGCGCGTTCGTTCCG 33844 || | | | |||||| |||||||| | | || |||| || ||| ||||||| Sbjct 245 CGTCGTCGATCGCTGGTATGAGCCGCCAATCTCTTTCAACGGCCTGGCGAAGACGTTCCG 186 Query 33845 GGCCGCGCCGCATCACAGCTCGGCCATCTACG-TGAAGCGCAACATCCTGGTGCAGTCGT 33903 || ||| ||||||||| || | ||| ||| |||||||||||||| | ||| || Sbjct 185 CGCGGCGGTGCATCACAGTTCACCGATC-ACGATGAAGCGCAACATCTTAGTGAGCATGT 127 Query 33904 ACATCGAGCATCCGCTGCTGCCGCGCGCGGACTTCAGCCGGTTCGTGCTGGAGTACCTGG 33963 || || | ||||||| | ||| |||||||| | | || ||| | ||| Sbjct 126 TCAAGCCCCACCGGCTGCTGTCAAAGCAGGATTTCAGCCGCTATGCGCAGGATTTTATGG 67 Query 33964 TGTTCGCGAATAGCTACCTCGAGCGGCGCACGAACCGGCTCGGC 34007 |||||| || |||| | ||| ||| ||||| |||||| Sbjct 66 TGTTCGGCAACAGCTTTATGGAGTCGCGTTATAACCGCCTCGGC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118706671688136