Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq193866 82.4 2e-11 seq49436 80.6 7e-11 >seq193866 Length=203 Score = 82.4 bits (90), Expect = 2e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 29381 TGCTGGGCGAGGACGAGCAGTGGCGTCAGATCGTCACCGTACTCGATGCGATCGAGGGCG 29440 |||| |||||||| |||| | || |||||||||| | | |||||| | |||| Sbjct 16 TGCTCTGCGAGGACAAGCAATTCCGCCAGATCGTCAACATTGAAGATGCGTTGCGCGGCG 75 Query 29441 GCTGCGACTTGTTCGACCTGGA-GAGACTTCGGCGCCGGTACAGTGCAGAGGCTTTCGCG 29499 |||||||| |||| ||||| || ||| || || |||| | || | ||| | Sbjct 76 GCTGCGACCTGTTTGACCTCGACGAG-CTGCGAGAGGAAAACAGCGATGAAGATTTTGAC 134 Query 29500 AACCTGCTGATGTGCCAGTTCATCGACGATTCGGTGTCGGTGTTCAAGCTGGCCGAGCTG 29559 |||||| | |||||| | |||||||||||| | ||| || ||| | ||| ||| || Sbjct 135 AACCTGTTCATGTGCAACTTCATCGACGATACATCGTCCGTCTTCCCGATGGGCGAAATG 194 Query 29560 CAGCGCTGC 29568 ||||||||| Sbjct 195 CAGCGCTGC 203 >seq49436 Length=832 Score = 80.6 bits (88), Expect = 7e-11 Identities = 99/133 (74%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 26981 GCCGTTCCAGCCGATCATGATCCGGTCGA-GCGCAGACTGGTTGAGGATCACATTGCGGA 27039 ||||||||| ||||||||||| ||||||| || | | | | || | |||| ||||| | Sbjct 828 GCCGTTCCAACCGATCATGATGCGGTCGAGGCCCTGGC-GTTTCACGATCTGGTTGCGAA 770 Query 27040 TGCGTTGCTGGAAGTCGGGGAATTTCGCCCAGGCGTCGAGCTTGCGGTACGTAATGGCCG 27099 | || ||||||||| |||||| |||||||||| |||||| || | | ||||| Sbjct 769 TACGGATCTGGAAGTCTTTGAATTTACCCCAGGCGTCCAGCTTGGAATATTTCAGGGCCG 710 Query 27100 TGTCGTAGTCGGT 27112 |||| ||| ||| Sbjct 709 TGTCAAAGTTGGT 697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129298301435244