Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq142870 127 1e-24 seq8367 116 2e-21 seq7705 111 1e-19 >seq142870 Length=314 Score = 127 bits (140), Expect = 1e-24 Identities = 212/302 (70%), Gaps = 6/302 (2%) Strand=Plus/Plus Query 6242 GCCATCAGCTGGCCAAAGTTACCCTTGTACGCTTCGTTGTACGCCTCAACGCCTTTCTGT 6301 |||||||||||||| ||||| |||||||| | || | | || ||||| ||||| Sbjct 7 GCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTGC 66 Query 6302 GGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTCACCTTGAAGTCATCGCGACCAGCG 6361 | |||||||| |||||| | ||||| || || |||||||| ||||| || Sbjct 67 GCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTGA 126 Query 6362 CAGGATTTCTGTAGCGCCTCAAAG--GAATTGGGAATCTGCTTGAGGGCGTCGTTTATGC 6419 ||||| ||| | |||| || | || | |||| || ||| |||||| |||| Sbjct 127 CAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCG--ATCTCTTTCAGGCTGTCGTTGATGC 184 Query 6420 CGTTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCAGATTAGGTATTGGTA 6479 | || || || || || || || || |||||||||||||| ||||| || | || | Sbjct 185 CATTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGA 244 Query 6480 CCTTGTCAATGG-GAAACTGTCTGCCATACACTCCCCACTCCACGAAATACGCACCGACG 6538 |||||| | || |||| || | || || || |||||||| |||||||| | ||||||| Sbjct 245 TCTTGTCGACGGTGAAATTG-CGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACG 303 Query 6539 AC 6540 || Sbjct 304 AC 305 >seq8367 Length=9740059 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | ||| |||| ||| | ||| |||||||| ||||| ||||| || Sbjct 8893444 CCTCCCCTCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 8893385 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | ||| | || |||||||| || || ||||| || || | ||||| || | || Sbjct 8893384 AGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 8893325 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| ||||| || || | | || | |||| || ||||| Sbjct 8893324 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCACTGGGTTCAACC 8893265 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| ||||| || || || || |||||||||||||||||||| Sbjct 8893264 TCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 8893218 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | || |||| ||| | ||| || ||||| ||||| ||||| || Sbjct 8892988 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 8892929 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | ||| |||| |||||||| || || || || || || | ||||| || | || Sbjct 8892928 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGGA 8892869 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| || || || || | | || | |||| || |||||| Sbjct 8892868 ATGCCTTCCTTGTCTTGGATTTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACC 8892809 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||| ||| ||||| || || || || |||||||||||||||||||| || Sbjct 8892808 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 8892759 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || |||| | || |||| ||| | ||| || ||||| ||||| ||||| || Sbjct 8893216 CCACCTCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 8893157 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || |||||||| || || ||||| || || | ||||| || | || Sbjct 8893156 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 8893097 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| || || || ||| | | || | |||| || |||||| Sbjct 8893096 ATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACC 8893037 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||| ||||| || || || || |||||||||||||||||||| Sbjct 8893036 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 8892990 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| ||||||||| ||||| ||||| || ||| | || | || ||| Sbjct 8893654 ACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCC 8893595 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | ||||| || | || | || || ||||| Sbjct 8893594 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGG 8893535 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| || || || || || | |||| || |||||| || | || ||||| | Sbjct 8893534 ATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCT 8893477 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || || ||||||||||||||||| Sbjct 8893476 TGCCAGTAAGGGTTTTCACAAAGATCTGCAT 8893446 >seq7705 Length=13065498 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | || |||| ||| | ||| || ||||| ||||| ||||| || Sbjct 4578646 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578587 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||||||| || || ||||| || || | |||||| || | || Sbjct 4578586 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGGGGA 4578527 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | ||||||||||| |||||| ||||| || || || | |||| | ||| | Sbjct 4578526 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC--ATTCTCAATGGTGTCACTAGGCTCGA 4578469 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||| || ||||| | |||||||||||||||||||| Sbjct 4578468 CCTCCAGAGTGATGGTCTTACCCGTCAAGGTCTTCACAAAGATCTGCAT 4578420 Score = 98.7 bits (108), Expect = 6e-16 Identities = 164/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | || |||| ||| | ||| || ||||| ||||| ||||| || Sbjct 4578418 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578359 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||||||| || || ||||| || || | ||||| || | || Sbjct 4578358 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 4578299 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | ||||||||||| ||||| ||||| || || || | |||| || || | Sbjct 4578298 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCGATGGTATCACTGGGTTCCA 4578241 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 | || | ||| ||||| || || || | |||||||| ||||||||||| || || Sbjct 4578240 CCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATGTTGGT 4578186 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || |||| |||||||| || || ||||| Sbjct 4578838 TCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 4578779 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | || | ||||||||||| ||||| || ||| Sbjct 4578778 ATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTC 4578719 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || ||||| || | || ||||| || || || | ||||||||| Sbjct 4578718 TCAATGGTGTCACTGGGTTCAACCTCCAACGTGATGGTCTTGCCAGTCAAGGTCTTCACA 4578659 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 4578658 AAGATCTGCAT 4578648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323718523417008