Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq23847 185 3e-42 >seq23847 Length=8263 Score = 185 bits (204), Expect = 3e-42 Identities = 404/587 (69%), Gaps = 21/587 (4%) Strand=Plus/Plus Query 53116 TACCAACTCATCTACGCCGATCCCTGCTGGTCCTACGACAACAAAGGCACCCG-GGCGAA 53174 || ||||||||||| |||||||| |||| |||| ||||| | || | |||| Sbjct 5205 TATCAACTCATCTATGCCGATCCGCCCTGGAGTTACGGCAACACAATCAGCAATGGCGCC 5264 Query 53175 GGCTGACAATCACTACCCGACCATGACGCTGGAGCAGCTGAAGCGCCTCCCTGTTTGGGA 53234 | | | ||||||||| || |||| ||| | ||||||||||| || || |||| Sbjct 5265 G-CAGGTAATCACTACAGCACGATGAGCATGGTAGACCTGAAGCGCCTGCCGGTATGGGC 5323 Query 53235 TCTGGCCGCTGACGATTGCGTGCTCGCGATGTGGTGGGTTGGCC-CGATGGAGCGCGAGG 53293 | | || || ||| |||||||||||||||||| ||| | | | | |||| Sbjct 5324 TGTTGCTGCGCCAGATAGCGTGCTCGCGATGTGGTACACCGGCAACCACAGCCAG-GAGG 5382 Query 53294 CGCGCGCACTGGCCGAAGCGTGGGGCTTCAAGGTCCGGAACATGAAGCTGTTCACATGGG 53353 || | ||||| ||||| ||||| || | ||| | | ||||| |||||| |||| Sbjct 5383 CGATAGATCTGGCAGAAGCCTGGGGATTTAGCGTCAGAACGATGAAAGCGTTCACCTGGG 5442 Query 53354 CGAAGCTCAACCAGATGGCCGAAC-GCGACATCACCACGGCGCTG--GCCGCCGGCAAGG 53410 ||| || |||||| |||||||| ||| | ||| || ||||||| || || ||| Sbjct 5443 TGAAACTGAACCAGCAGGCCGAACTGCG-CTTCAACAAGGCGCTGCTGCAGCAAACAATC 5501 Query 53411 TGCCCGACTTCGCCGCCTTCATGCAGCTGCTGAACGACAAAACGAAGATGGGCCTCGGGA 53470 | | |||||| ||| | | | | |||| |||| |||| |||| ||| | Sbjct 5502 TTC--GACTTCACCGACCTACTCGACATGCTCAACGCAGAAACCCGGATGAATGGCGGCA 5559 Query 53471 ACTACACCCGCGCCAACAGCGAGGACGTGCTGGTGGCCGTTCGCGGCCGTGGGCTGGAGC 53530 | ||||| ||||||||| ||| |||||| || | ||||||||||||| || | |||| Sbjct 5560 ATTACACGCGCGCCAACTCCGAAGACGTGTTGATCGCCGTTCGCGGCCAAGGCATCGAGC 5619 Query 53531 G-GCTGGCCGGCAAC-GTGAAGCAGATGGTCTAC-GC-GCCGATCGGCCGGCACAGCGCG 53586 | || || ||| | || |||||| | || | | || ||| ||||| |||||||||| Sbjct 5620 GCGCCAGC--GCATCAGTAAAGCAGGTTGTGTTCAGCTGCC--TCGGCGAGCACAGCGCG 5675 Query 53587 AAGCCTGATGAGGTGCGCCAGCGCCTCGATCGCCTCTATGGCCCGGACATTTCCCGCATC 53646 || || || || |||| |||||| || | || || ||| ||| | || || ||| Sbjct 5676 AAACCCTGGGAAGTCCGCCGGCGCCTTGAGCTGCTTTACGGC---GACGTGTCACGAATC 5732 Query 53647 GAGCTGTTCAGTCGGGGCGATGCCCCCGGCTGGCACCACTGGGGCAA 53693 || || ||||| || |||||||| || |||||| | || ||||| || Sbjct 5733 GAACTATTCAGCCGTGGCGATGCGCCAGGCTGGGATCATTGGGGGAA 5779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193629926645232