Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq139365 194 3e-44 >seq139365 Length=376 Score = 194 bits (214), Expect = 3e-44 Identities = 266/370 (72%), Gaps = 9/370 (2%) Strand=Plus/Minus Query 22986 TTCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGCTTGGTGT 23045 ||| | |||||| || || ||||| |||||||| || |||||| ||||| || || Sbjct 373 TTCCAGGAACAGCATCTGGGCGCAGCCTTCGCCGGCATAGATCTTGGCCGGCAGCGGCGT 314 Query 23046 GGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACGTT 23105 ||| || || || ||||| || | ||||| |||||| |||||||||||||| ||||| Sbjct 313 GGTGTTCGAGAATTCCAGCGTGACGTGGCCTTCCCATTCGGGTTCCAGCGGCGTCACGTT 254 Query 23106 TACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAATACGTCACG 23165 |||||||||||||| ||||| || || ||||| |||||||| | ||| || Sbjct 253 GACGATGATGCCGCAGCGCGCGTAGGTGCTCTTGCCCAGGCAGATCGTCAGCACGCTGCG 194 Query 23166 CGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAATGATCAG 23225 ||||||| ||||| |||| |||| ||||| ||||| ||| ||||| ||||| Sbjct 193 CGGAATGCGGAAGTATTCCACCGTGCGGGCCAGCGCGAACGAGTTGGGCGGGATGATGCA 134 Query 23226 GCCTTGGCCGTTTGGAACGTGCTTCGTAACGAAATTGTCTTCGGTGAAATTCTTTGGATC 23285 | | | ||| || ||| || | ||||| | ||||| ||||||||| || || Sbjct 133 GACATCGCCCTT--GAA-GTCC------ACGAACGAGCCTTCGTCGAAATTCTTGGGGTC 83 Query 23286 GACAACCGCGTTATTCAGGTTGGTGAAAACCTTGAATTCGTTACCGCAACGAATATCGTA 23345 ||| | | | ||| | ||| ||||| | ||||||||||| |||| || | ||||| Sbjct 82 GACGATGGTGGAATTGATGTTCGTGAAGATCTTGAATTCGTCGGCGCAGCGCACGTCGTA 23 Query 23346 GCCGTAGCTG 23355 |||||||||| Sbjct 22 GCCGTAGCTG 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894998589582880