Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_017985.1 Length=40128 Score E Sequences producing significant alignments: (Bits) Value seq23847 179 9e-41 >seq23847 Length=8263 Score = 179 bits (198), Expect = 9e-41 Identities = 355/515 (69%), Gaps = 13/515 (3%) Strand=Plus/Minus Query 3154 GTCAATTTGTCGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCGGCGAAC 3213 |||||||| || |||||||| || || || |||| | || |||||||| || |||| Sbjct 7367 GTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAAC 7308 Query 3214 CATTTCGATAGACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTG 3273 |||||| || |||||| || |||||||| |||| | |||||| || ||||| ||||| Sbjct 7307 CATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCTG 7248 Query 3274 AACTAACCAACTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCCGC 3333 ||| |||||||| |||||||| |||| ||| || ||||| ||||| || || ||||| Sbjct 7247 AACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCGC 7188 Query 3334 --TCGTTTTAATGCTGCCCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACA 3391 || ||| | || |||| || | ||| | ||| ||||| ||||| ||| | Sbjct 7187 CCTCCGTTTCCCGGTGT--TCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAACTGCC 7130 Query 3392 G--GTGATTTAGTTCCGTCTGGTTTGGTGC-TGCTTTCCTTGTAGACGAACACCCATTTG 3448 | || | | | ||| | ||| | | |||| || | | || || || | | Sbjct 7129 GCGGTCACTCCG--CCGCCAGGTCGTTTCCGTGCTGTCGTA-TGCACAAAGACGTACC-G 7074 Query 3449 TGA-TGATTGCCGATTTGCTTTTTCAGCACCCGGCAAGCGGTATCATTCAGCGCCACTCC 3507 ||| || || || || || | || ||||| |||||||| ||||| || || || Sbjct 7073 TGAGTGCTTCCCAATCTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGAGCAACGCC 7014 Query 3508 AATGGCATGATTAGACTTGCTTTGTTCCGGGTGTATCCATGCCACCTTTCGTTGCATGTC 3567 ||| || | | | ||| | || ||||| |||||||||||||||| ||||||||| Sbjct 7013 AATAGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTTTGCATGTC 6954 Query 3568 TATCTGCTGCCACTCCAGATTGATAATGTTAGACCTCCTTAAGCCAGTAGAAAGCGCAAA 3627 | |||| |||||| |||| ||| || || || | | || |||||| | || ||||| Sbjct 6953 AACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAGGGCAAA 6894 Query 3628 CTCTACGACTGACTTTAGCGGTTCCTGGCATTCAT 3662 | || || | | | | | ||||| ||||| ||| Sbjct 6893 AACGACAACGGGCCTAAACTGTTCC-GGCATGCAT 6860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127935654281880