Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq74496 89.7 5e-13 seq200773 87.8 2e-12 >seq74496 Length=601 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 75944 TTGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAAC 76003 ||||| |||| ||| ||| | ||||| || |||||||||||||||||||||||||||||| Sbjct 234 TTGGTAGGCCCCCCGAGAGTCGAACTCGGCACCAACGGATTATGAGTCCGCTGCTCTAAC 175 Query 76004 CA--ATTGAGCTAAAGGCCCA 76022 || ||||||| ||||||| Sbjct 174 CAGGCATGAGCTAGAGGCCCA 154 >seq200773 Length=230 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/114 (79%), Gaps = 9/114 (8%) Strand=Plus/Plus Query 75944 TTGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAAC 76003 |||||||||| || |||| |||| |||||||| ||||||||||||| ||||||| || Sbjct 3 TTGGTGGGCCCACCAGGACTCGAACCTGGAACCAAAGGATTATGAGTCCTCTGCTCTGAC 62 Query 76004 CAATTGAGCTAAAGGCCCA------AAAATGGT-CCGCCTGACAGGATTCGAAC 76050 | ||||||||| ||||||| ||| |||| ||| || || ||||||||| Sbjct 63 C-ATTGAGCTATAGGCCCATACTTCAAACTGGTGCCGAATGTCA-GATTCGAAC 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531728675278320