Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_018274.1 Length=36847 Score E Sequences producing significant alignments: (Bits) Value seq38063 116 9e-22 seq145416 105 2e-18 seq139399 86.0 1e-12 >seq38063 Length=1017 Score = 116 bits (128), Expect = 9e-22 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 15866 AACGAGCTGCGGCTGCGCGACAACAGCCCGGCCGGCGAAGCCTTGCAGCCCTTCGGCTGG 15925 ||||||||||| ||||||||||||||| | | || ||| | | ||| || |||||| Sbjct 766 AACGAGCTGCGCCTGCGCGACAACAGCGCCGATGGAGAATCGCTCTGGCCGTTTGGCTGG 825 Query 15926 ATCATTCACCGGCCGCGTGCGCGCTCCGGCTATGTGGCCCGCAGCGGCCTGTTCCGCGTG 15985 ||||| ||| || || ||||| |||||| | ||||||| || ||||| || || Sbjct 826 ATCATGCACACGCACCGCTCGCGCAGCGGCTACATCGCCCGCACGGGTCTGTTTCGGGTA 885 Query 15986 CTGGCCTGGCCGTACCTGTTCCGTCACTACGCCACCTCCGACCTGGCGGAAATGCTGGAA 16045 || |||||||||| || ||| ||| ||| ||||||||| || | ||||| Sbjct 886 CTCGCCTGGCCGTGGCTCTTCAAGAACTTTGCCGTGCGCGACCTGGCTGAGTTCCTGGAG 945 Query 16046 ATCTATGGCCTGCCGATCCGGCTGGGGAAATA 16077 ||||| || |||||| | || ||||| | ||| Sbjct 946 ATCTACGGGCTGCCGCTGCGTCTGGGCACATA 977 >seq145416 Length=624 Score = 105 bits (116), Expect = 2e-18 Identities = 335/515 (65%), Gaps = 17/515 (3%) Strand=Plus/Minus Query 20736 TGCGCGAGTGGATCGGTCAGCGTGTCATCAAGGACATGGCGGCCCAGGGCTACCAGATCA 20795 ||||||| ||||| || |||| |||||| | | || | ||| |||||| ||| Sbjct 614 TGCGCGAATGGATTGGCGAGCGGGTCATCCATGGGCTGCAGAGCCACGGCTACACCGTCA 555 Query 20796 CCAACAAGCTCTTCGAATCGACCGTGGGCGTGAAACGTACCGACATCGAGGACGACAACC 20855 ||||||| |||||| ||| |||| ||| || || | ||| || ||||||| | Sbjct 554 AAAACAAGCCCTTCGAGCTGACGGTGGCCGTTCCGCGCACGGCCATTGATGACGACACCT 495 Query 20856 TCGGCGTCTACGGACCGCTCATGCAGGAAATGGGGCGCGCTGCCGGCGCGCATCCCGACG 20915 || |||||| ||||| ||| || |||| ||| |||| | || | || |||| Sbjct 494 ATGGTGTCTACACCCCGCTGATGACCGAGCTGGGTCGCTCTGCTGCGGCCAACCCAGACG 435 Query 20916 AGCTGGTCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAACT 20975 ||||||| |||| | | |||||||| ||| | || |||||| ||||| || || Sbjct 434 AGCTGGTGTTCGGCATCCTCAAGGCGGGCGATAGCACAGCCTGCTATGACGGCAAACCCT 375 Query 20976 TCTTCGACACCGATCACCCGGTCTATCCGAACGTGGATGGC-ACCGGCACGGCGACCACC 21034 |||| | |||| ||| |||| | | ||| | | ||| | | ||| |||| || Sbjct 374 TCTTTGCAGCCGACCACATGGTCAA---GGACGAGAAGGGCAAGCTGCA-GGCGCAGTCC 319 Query 21035 GTTAGCAACCTGTTCGCGCCGGCCGCTGATCCGGGGGCGGCCTGGTATCTGCTCGACACC 21094 | | |||| || |||| || || | | ||||| ||||||||||| Sbjct 318 AATGCCGACCT-----CGGCGGC----AAT---GGCGAGAAGTGGTACGTGCTCGACACC 271 Query 21095 AGCCGCAGCCTCAAGCCGTTGATCTACCAGGAGCGCATGAAACCGTCGTTCACTTCGATG 21154 | || ||||||| |||||| |||||| |||| ||| || ||| | ||| Sbjct 270 ACTCGGGCGATCAAGCCTCTGATCTTCCAGGACCGCAAGAAGCCCAACTTCGTGGCCATG 211 Query 21155 ACCAAGGAAGACGACGAGCAGGTCTTCATGGCCGACGAGTACCGCTACGGCGTGCGCTCC 21214 || ||| ||| | ||||||| | ||||| |||||||| ||| Sbjct 210 ACGGCCGAAACGGACCCCAACGTCTTCACCAAGGCCGAGTTTGTGTACGGCGTCGATTCC 151 Query 21215 CGCTGCAACGTCGGCTTCGGCTTCTGGCAACTGGC 21249 ||||||||||| || || ||||||||||| |||| Sbjct 150 CGCTGCAACGTGGGATTTGGCTTCTGGCAGATGGC 116 >seq139399 Length=451 Score = 86.0 bits (94), Expect = 1e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 20904 CGCATCCCGACGAGCTGGTCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACG 20963 |||| ||||||||||| |||||||| || || |||| ||| ||||| | |||| || Sbjct 3 CGCACCCCGACGAGCTCGTCTTCGCGCTCCTGCAGGCGGGCTTCGCCACGCGGTGCTTCG 62 Query 20964 ACGGTCAAAACTTCTTCGACACCGATCACCCGGTC 20998 |||| || ||||||||||||| |||||||| ||| Sbjct 63 ACGGCCAGTACTTCTTCGACACGGATCACCCTGTC 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117465290557788