Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq23847 255 1e-63 >seq23847 Length=8263 Score = 255 bits (282), Expect = 1e-63 Identities = 407/583 (70%), Gaps = 16/583 (3%) Strand=Plus/Minus Query 3074 CACTGGTTGCCCCAGTGATCCCAGCCTGGCGCCGCTGAACGGCTAAATAACTCGATGCGC 3133 || || || ||||| ||||||||||||||||| | |||||| |||| ||||| || Sbjct 5785 CATTGATTCCCCCAATGATCCCAGCCTGGCGCATCGCCACGGCTGAATAGTTCGATTCGT 5726 Query 3134 GGCACGTCACCATAGAGACGTTCTAACCGATGGCGGGCCTCCCAGGGTTTCGCACTATGG 3193 | |||||| || || || | || | || ||||| | |||||||||||||| || || Sbjct 5725 GACACGTCGCCGTAAAGCAGCTCAAGGCGCCGGCGGACTTCCCAGGGTTTCGCGCTGTGC 5666 Query 3194 CGGCCTAACGGGCTGTAGATAACCTGTTTCAC------GCTGGCATCTTTGCGTTCGAGC 3247 ||| | |||| | | |||||| || || |||||| ||| |||| Sbjct 5665 TCGCCGAGGCAGCTGAACACAACCTGCTTTACTGATGCGCTGGC------GCGCTCGATG 5612 Query 3248 CCGGCGCCGCGGGTAGCGATAAGAAGATCCTCGGTGTTGGCCCGCGTATGGTTTCCGCCA 3307 || |||||| ||||| | | || |||| |||||| ||||| | || |||||| Sbjct 5611 CCTTGGCCGCGAACGGCGATCAACACGTCTTCGGAGTTGGCGCGCGTGTAATTGCCGCCA 5552 Query 3308 TTCATGCGCGTTTGCGCGTTAAGCAGGTGCAAAAAGTCGTGAAAATCCTCAATTTCGCCA 3367 ||||| || |||| ||||| |||| || | | |||| || || ||| | Sbjct 5551 TTCATCCGGGTTTCTGCGTTGAGCATGTCGAGTAGGTCGGTGAAGTCGAAGATT--GTTT 5494 Query 3368 GCTTC--CAGCGCTTTATTGATGTGCTGCTCTGCCAGTTGGTTGAGTTTAACCCATGTAA 3425 ||| | |||||| || |||| | || | || ||| | ||||| ||||| ||||| || | Sbjct 5493 GCTGCAGCAGCGCCTTGTTGAAGCGCAGTTCGGCCTGCTGGTTCAGTTTCACCCAGGTGA 5434 Query 3426 AGCCCTTCATGGTGCGCACCGTAAAGCCCCAGGCTTCGGCCAGATCCATAGCTTCACGGT 3485 | | ||||| || | || |||| ||||||||||| |||||||| || || || || Sbjct 5433 ACGCTTTCATCGTTCTGACGCTAAATCCCCAGGCTTCTGCCAGATCTATCGCCTCCTGGC 5374 Query 3486 TGTGGGTGCCGGTGTACCACATCGCCAGAACGGCGTTTTCTGCGGCCAGCTCCCACACAG 3545 ||||| ||||||||||||||||||| || ||| | | || || | |||| || | Sbjct 5373 TGTGGTTGCCGGTGTACCACATCGCGAGCACGCTATCTGGCGCAGCAACAGCCCATACCG 5314 Query 3546 GGAGGCGTTTCATATCGATCAAGCTCATGGTGTCGTAATGGCTGGCTGCCGCGCCGTTGC 3605 | ||||| |||| || | || |||||| ||| ||| || | |||| ||||| |||| Sbjct 5313 GCAGGCGCTTCAGGTCTACCATGCTCATCGTGCTGTAGTGATTACCTGCGGCGCCATTGC 5254 Query 3606 TTACTGTGTTGCCGTAGCTCCACGCGGGATCTGCATAGATAAG 3648 | | |||||||||||| ||||| | ||||| |||||||| || Sbjct 5253 TGATTGTGTTGCCGTAACTCCAGGGCGGATCGGCATAGATGAG 5211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127444207767552