Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq8367 116 3e-21 seq142870 107 2e-18 >seq8367 Length=9740059 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| |||||||| || || ||||| || | | || | | || |||| ||| Sbjct 8893648 TGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTGC 8893589 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| |||||||| |||||||||||||| ||||| || || Sbjct 8893588 TTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGGATCTTG 8893529 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | || || |||||||||| || ||||| || Sbjct 8893528 GCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCAGTA 8893469 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | ||||| ||||| ||||||||| Sbjct 8893468 AGGGTTTTCACAAAGATCTGCATG 8893445 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | || || || | || ||||| || ||||| || || ||||| || | Sbjct 8893444 CCTCCCCTCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 8893385 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | || |||| ||||| || ||||| |||| | ||| |||||||| ||| Sbjct 8893384 AGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 8893325 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || ||||| || || || ||| |||| | ||||||| | ||| || Sbjct 8893324 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCACTGGGTTCAACC 8893265 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| |||| || ||||| || | || || ||||| ||||||||| Sbjct 8893264 TCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCATG 8893217 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| || | | || | |||| |||| ||| Sbjct 8892964 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGC 8892905 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| | ||| |||||||| ||||||||||| || ||||| ||||| Sbjct 8892904 TTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATTTTG 8892845 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | |||||| | || || || || |||| || ||||| || Sbjct 8892844 GCCTTCACATTTTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTC 8892785 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTAC 101475 | || || ||||| ||||||||| |||| Sbjct 8892784 AGGGTCTTCACAAAGATCTGCATGTTTAC 8892756 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| || | | || | | || |||| ||| Sbjct 8893192 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTGC 8893133 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| |||||||| ||||||||||| || ||||| ||||| Sbjct 8893132 TTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATTTTG 8893073 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || |||| | |||||| | || || || || |||| || ||||| || Sbjct 8893072 GCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTC 8893013 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 8893012 AGGGTCTTCACAAAGATCTGCATG 8892989 >seq142870 Length=314 Score = 107 bits (118), Expect = 2e-18 Identities = 207/303 (68%), Gaps = 2/303 (1%) Strand=Plus/Plus Query 43140 GCCATTAATTGACCAAAGTTGCCTTTGTACGGTTCATTCCACGAGGAAACACCTTTTTGT 43199 ||||| | || || |||||||| ||||| || |||| ||| | || || || || || Sbjct 7 GCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTGC 66 Query 43200 GGTTTCTGTATAGCCGCCCACGGATCGTGTATGGAAACTTTGAAGTCGCTTCGACCCGCA 43259 | ||| || | || || |||||||||| || || ||||||||||| || ||| | Sbjct 67 GCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTGA 126 Query 43260 CAAGATTTTTGAAGAGCTTCAAAACTGCCAGGAATAGATTTTAAACTGTCATTAATGCCG 43319 || || || | || | |||||||| || ||| | ||||| || ||||| Sbjct 127 CAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCCA 186 Query 43320 TCACCGCCGCATATCGGAATAAATCCGTACAACAAATGAGACAAATTGGGTAAAGGCACT 43379 | |||||||| ||||| ||||| ||||||| || || | || || | || | Sbjct 187 TTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGATC 246 Query 43380 TTGTTGACAG-GAAATGAACGACCGTATACGCCCCATTCTACAAAATAAGCGGCCACGGC 43438 |||| ||| | ||||| || ||||| |||||||| || || ||||||| | ||| | Sbjct 247 TTGTCGACGGTGAAAT-TGCGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACGAC 305 Query 43439 TTT 43441 ||| Sbjct 306 TTT 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395161371189102