Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq7705 114 1e-20 >seq7705 Length=13065498 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| ||||| || || ||| ||| || || || ||||| ||||| Sbjct 4578646 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578587 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||| |||||| || ||||| ||||| | || ||||| | |||| Sbjct 4578586 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGGGGA 4578527 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || | ||| ||| Sbjct 4578526 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTCTCAATGGTGTCACTAGGCTCGACC 4578467 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| || || || || |||||||| || || ||||| ||||||||| Sbjct 4578466 TCCAGAGTGATGGTCTTACCCGTCAAGGTCTTCACAAAGATCTGCATC 4578419 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| ||||| || || ||| ||| || || || ||||| ||||| Sbjct 4578418 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578359 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||| |||||| || ||||| ||||| | ||| ||||| | |||| Sbjct 4578358 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 4578299 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || ||| | | | || | |||||| Sbjct 4578298 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTATCACTGGGTTCCACC 4578239 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || ||||| || || || || |||||||| Sbjct 4578238 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 4578192 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| || | ||| || ||| ||| || || || ||||| ||||| Sbjct 4578874 CCACCCCTCAGGCGCAGGACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578815 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||| |||||| || ||||| ||||| | ||| ||||| | |||| Sbjct 4578814 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 4578755 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGAC--GCCTCCA 48717 | |||||||||||| ||||| || || | | || | | | || | || | Sbjct 4578754 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GTTCTCA-ATGGTGTCACTGGGTTCAA 4578697 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||||| ||| || || || || ||||| || || ||||| ||||||||| Sbjct 4578696 CCTCCAACGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATC 4578647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379863813807378